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PLM3-1_170_b1_sep16_scaffold_12700

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_12700_trna_2
unknown

Not on your lists

comp(38..127)
DNA (90bp)
transferRNA Ser
PLM3-1_170_b1_sep16_scaffold_12700_trna_1
unknown

Not on your lists

comp(227..312)
DNA (86bp)
transferRNA Ser
PLM3-1_170_b1_sep16_scaffold_12700_1
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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531..1976
DNA (1446bp) protein (482aa)
Putative carboxylyase-like protein (Fragment) bin=GWD2_Deltaproteobacteria_55_8 species=Clostridia bacterium enrichment culture clone BF genus=unknown taxon_order=unknown taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
menaquinone biosynthesis decarboxylase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_12700_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2203..2739
DNA (537bp) protein (179aa)
Short-chain dehydrogenase/reductase SDR bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b1_sep16_scaffold_12700_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2750..4186
DNA (1437bp) protein (479aa)
(S)-2-hydroxy-acid oxidase subunit D (EC:1.1.3.15)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_12700_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4149..4682
DNA (534bp) protein (178aa)
id=2104314 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_12700_5
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5796..6722)
DNA (927bp) protein (309aa)
Tetratricopeptide TPR_1 repeat-containing protein Tax=Microcoleus vaginatus FGP-2 RepID=F5UEE0_9CYAN
Tetratricopeptide TPR_2 repeat-containing protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM3-1_170_b1_sep16_scaffold_12700_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6752..7048)
DNA (297bp) protein (99aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=SYS_GEODF
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying 8 items

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