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PLM3-1_170_b1_sep16_scaffold_13386

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_13386_1
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..293)
DNA (291bp) protein (97aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Paenibacillus sp. HGF7 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b1_sep16_scaffold_13386_2
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(373..855)
DNA (483bp) protein (161aa)
Transcriptional regulator, CarD domain protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
CarD family transcriptional regulator CdnL
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_13386_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(995..1315)
DNA (321bp) protein (107aa)
ribosomal protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b1_sep16_scaffold_13386_4
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1355..2755)
DNA (1401bp) protein (467aa)
id=1993804 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b1_sep16_scaffold_13386_trna_1
unknown

Not on your lists

2863..2935
DNA (73bp)
transferRNA Cys
PLM3-1_170_b1_sep16_scaffold_13386_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3045..3635
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6PPR8_9ZZZZ
DedA family protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b1_sep16_scaffold_13386_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3638..3898)
DNA (261bp) protein (87aa)
Glutaredoxin, GrxC bin=GWD2_Deltaproteobacteria_55_8 species=Rhodospirillum photometricum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glutaredoxin 3
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b1_sep16_scaffold_13386_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3984..4565)
DNA (582bp) protein (194aa)
TPR repeat protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_13386_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4613..4930)
DNA (318bp) protein (106aa)
TPR repeat protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_13386_9
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4927..6204)
DNA (1278bp) protein (426aa)
Peptidoglycan-binding domain 1 protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
gspA; general secretion pathway protein A
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b1_sep16_scaffold_13386_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6211..7248)
DNA (1038bp) protein (346aa)
Pilus (MSHA type) biogenesis protein MshL bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pilus (MSHA type) biogenesis protein MshL
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 11 items

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