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PLM3-1_170_b1_sep16_scaffold_4538

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_4538_1
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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540..1223
DNA (684bp) protein (228aa)
Lytic transglycosylase catalytic bin=GWD2_Chloroflexi_49_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Lytic transglycosylase catalytic
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_4538_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(1204..2595)
DNA (1392bp) protein (464aa)
atm:ANT_28730 two-component sensor histidine kinase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
two-component sensor histidine kinase
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_4538_3
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(2666..3343)
DNA (678bp) protein (226aa)
atm:ANT_28720 OmpR family two-component response regulator bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
OmpR family two-component response regulator
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3-1_170_b1_sep16_scaffold_4538_4
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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comp(3352..3738)
DNA (387bp) protein (129aa)
50S ribosomal protein L7/L12 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N657_ANATU
rplL; 50S ribosomal protein L7/L12
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3-1_170_b1_sep16_scaffold_4538_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(3923..4465)
DNA (543bp) protein (181aa)
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rplJ; 50S ribosomal protein L10
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_4538_6
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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comp(4696..5412)
DNA (717bp) protein (239aa)
50S ribosomal protein L1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N659_ANATU
rplA; 50S ribosomal protein L1
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3-1_170_b1_sep16_scaffold_4538_7
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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comp(5415..5837)
DNA (423bp) protein (141aa)
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rplK; 50S ribosomal protein L11
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_4538_8
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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comp(5837..6745)
DNA (909bp) protein (303aa)
atm:ANT_18990 nusG; transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
nusG; transcription antitermination protein NusG
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_4538_9
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(6749..6973)
DNA (225bp) protein (75aa)
Preprotein translocase SecE subunit bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
secE; preprotein translocase subunit SecE
Tax=RBG_16_Chloroflexi_57_11_curated
Displaying 9 items

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