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PLM3-1_170_b1_sep16_scaffold_5420

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_5420_1
unknown

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comp(2..91)
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_5420_2
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

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comp(95..1135)
DNA (1041bp) protein (347aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase Tax=uncultured Chloroflexi bacterium PF7_9CHLR">RepID=H5SPF7_9CHLR
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3-1_170_b1_sep16_scaffold_5420_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1182..1898)
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX07944.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3-1_170_b1_sep16_scaffold_5420_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2122..2991)
DNA (870bp) protein (290aa)
Putative oxidoreductase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I967_CALAS
putative oxidoreductase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_5420_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2988..3176)
DNA (189bp) protein (63aa)
SelT/SelW/selH family protein Tax=Desmospora sp. 8437 RepID=F5SAA0_9BACL
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_5420_trna_1
unknown

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3333..3405
DNA (73bp)
transferRNA Ala
PLM3-1_170_b1_sep16_scaffold_5420_trna_2
unknown

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3560..3632
DNA (73bp)
transferRNA Ala
PLM3-1_170_b1_sep16_scaffold_5420_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4057..6678
DNA (2622bp) protein (874aa)
Leucine--tRNA ligase bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
leucyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3-1_170_b1_sep16_scaffold_5420_7
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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7034..7441
DNA (408bp) protein (136aa)
Endoribonuclease L-PSP, putative bin=GWB2_Chloroflexi_49_20 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
endoribonuclease L-PSP
Tax=GWC2_Chloroflexi_49_37_curated
PLM3-1_170_b1_sep16_scaffold_5420_8
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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7454..9478
DNA (2025bp) protein (675aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_5420_9
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(9726..9944)
DNA (219bp) protein (73aa)
coiled-coil 49..70 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
Displaying 11 items

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