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PLM3-1_170_b1_sep16_scaffold_3205

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3205_1
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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1..444
DNA (444bp) protein (148aa)
Two component transcriptional regulator, winged helix family Tax=Chloroflexaceae RepID=A7NMB3_ROSCS
winged helix family two component transcriptional regulator
Tax=BJP_08E140C01_Anaerolineales_40_8
PLM3-1_170_b1_sep16_scaffold_3205_2
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

441..1832
DNA (1392bp) protein (464aa)
histidine kinase (EC:2.7.13.3)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI00037A23BB
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3-1_170_b1_sep16_scaffold_3205_3
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

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1836..2855
DNA (1020bp) protein (340aa)
Putative uncharacterized protein Tax=Fischerella sp. JSC-11 RepID=G6FZZ9_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EHC08581.1}; species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_3205_4
uncultured beta proteobacterium, Betaproteobacteria, Proteobacteria, Bacteria

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2940..3209
DNA (270bp) protein (90aa)
Hypothetical conserved protein Tax=uncultured beta proteobacterium RepID=H5SP05_9PROT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL57891.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; environmental samples.;" source="uncultured beta proteobacterium.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_3205_5
RLO_PLX_64_10, Bacteria

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3217..3540
DNA (324bp) protein (108aa)
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b1_sep16_scaffold_3205_6
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3740..3901
DNA (162bp) protein (54aa)
Alpha/beta hydrolase fold protein Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Z7U3_9PSEU
alpha/beta hydrolase
Alpha/beta hydrolase {ECO:0000313|EMBL:AIQ59254.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
PLM3-1_170_b1_sep16_scaffold_3205_7
unknown

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comp(3827..3991)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3205_8
unknown

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4095..4241
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3205_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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4403..4783
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Marinobacter adhaerens (strain HP15) RepID=E4PMM2_MARAH
hypothetical protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_170_b1_sep16_scaffold_3205_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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4897..5382
DNA (486bp) protein (162aa)
PPOX class putative F420-dependent enzyme Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAW9_SPHTD
PPOX class putative F420-dependent enzyme
PPOX class putative F420-dependent enzyme {ECO:0000313|EMBL:ACZ39916.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3-1_170_b1_sep16_scaffold_3205_11
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

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5453..6346
DNA (894bp) protein (298aa)
hypothetical protein; K01259 proline iminopeptidase [EC:3.4.11.5] bin=bin9_gal15 species=Streptomyces prunicolor genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
proline-specific peptidase
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
PLM3-1_170_b1_sep16_scaffold_3205_12
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6586..7122
DNA (537bp) protein (179aa)
Methyltransferase type 11 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21EA8_SACD2
Methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ABD82971.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
PLM3-1_170_b1_sep16_scaffold_3205_13
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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7379..7675
DNA (297bp) protein (99aa)
ubiG; 3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
hypothetical protein bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_3205_14
unknown

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7694..8119
DNA (426bp) protein (142aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3205_15
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8402..9535
DNA (1134bp) protein (378aa)
VRR-NUC domain-containing protein Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DRI5_DESRL
VRR-NUC domain-containing protein
VRR-NUC domain-containing protein {ECO:0000313|EMBL:AEG58739.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
PLM3-1_170_b1_sep16_scaffold_3205_16
unknown

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9730..10254
DNA (525bp) protein (175aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3205_17
unknown

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10774..11316
DNA (543bp) protein (181aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3205_18
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

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11329..12564
DNA (1236bp) protein (412aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AIA2_9PROT
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
PLM3-1_170_b1_sep16_scaffold_3205_19
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

12856..13827
DNA (972bp) protein (324aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI000344CB4A
ring-hydroxylating dioxygenase, large terminal subunit
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_3205_20
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14086..15120
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI000365076A
Putative ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:EKQ66858.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_3205_21
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15217..16764
DNA (1548bp) protein (516aa)
Ribose import ATP-binding protein RbsA {ECO:0000313|EMBL:KHF36220.1}; EC=3.6.3.17 {ECO:0000313|EMBL:KHF36220.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1XP2.;"
Simple sugar transport system ATP-binding protein Tax=Paenibacillus barengoltzii G22 RepID=R9LAK8_9BACL
yufO; putative ABC transporter ATP-binding protein YufO
PLM3-1_170_b1_sep16_scaffold_3205_22
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16766..17356
DNA (591bp) protein (197aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI00037020C5
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:EKQ66802.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
inner-membrane translocator
Displaying 22 items

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