ggKbase home page

PLM3-1_170_b1_sep16_scaffold_3598

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3598_1
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

1..822
DNA (822bp) protein (274aa)
atm:ANT_07480 hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_3598_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

910..1440
DNA (531bp) protein (177aa)
putative ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative ABC transporter ATP-binding protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3598_3
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(1638..2561)
DNA (924bp) protein (308aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N460_ANATU
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_3598_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2712..3437)
DNA (726bp) protein (242aa)
Uncharacterized protein Tax=uncultured Chloroflexi bacterium RepID=Q2Z014_9CHLR
putative phosphoesterase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3598_5
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

3803..4312
DNA (510bp) protein (170aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_3598_6
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists


4379..5059
DNA (681bp) protein (227aa)
Peptidase M22 family protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
peptidase M22 family protein
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_3598_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

5186..5809
DNA (624bp) protein (208aa)
uracil-DNA glycosylase (EC:3.2.2.-); K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
uracil-DNA glycosylase (EC:3.2.2.-)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3598_8

Not on your lists

comp(6483..7079)
DNA (597bp) protein (199aa)
Marine sediment metagenome DNA, contig: S12H4_L03190 {ECO:0000313|EMBL:GAI77068.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_3598_9
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7255..7599)
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG27129.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
hypothetical protein AcelC_12446 bin=GWB2_Nitrospirae_rel_47_37 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_3598_10

Not on your lists

comp(7681..7956)
DNA (276bp) protein (92aa)
Marine sediment metagenome DNA, contig: S03H2_L03296 {ECO:0000313|EMBL:GAH40225.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=uncultured myxobacterium HF0070_11L13 genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
PLM3-1_170_b1_sep16_scaffold_3598_11

Not on your lists

comp(8008..8322)
DNA (315bp) protein (105aa)
Marine sediment metagenome DNA, contig: S01H1_L06901 {ECO:0000313|EMBL:GAF82885.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml bin=GWB2_Chloroflexi_54_36 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
PLM3-1_170_b1_sep16_scaffold_3598_12
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(8438..8776)
DNA (339bp) protein (113aa)
Tax=BJP_08E140C01_Anaerolineales_40_8
PLM3-1_170_b1_sep16_scaffold_3598_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(8799..9533)
DNA (735bp) protein (245aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2F5_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3598_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(9635..9955)
DNA (321bp) protein (107aa)
Microcompartments protein bin=GWB2_Chloroflexi_54_36 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
eutM; putative ethanolamine utilization protein EutM
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3598_15
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10061..11458)
DNA (1398bp) protein (466aa)
acetaldehyde dehydrogenase (EC:1.2.1.10)
Acetaldehyde dehydrogenase bin=GWB2_Chloroflexi_54_36 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=CG_Anaero_04
Displaying 15 items

View Taxonomy