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PLM3-1_170_b1_sep16_scaffold_2750

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2750_1
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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3..941
DNA (939bp) protein (313aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI00035E6CFE
SARP family transcriptional regulator
Tax=CG_Anaero_02
PLM3-1_170_b1_sep16_scaffold_2750_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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1056..1664
DNA (609bp) protein (203aa)
putative iron-sulfur protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative iron-sulfur protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_2750_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(1711..2847)
DNA (1137bp) protein (379aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Queuosine biosynthesis protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0Z3_9CHLR
putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
PLM3-1_170_b1_sep16_scaffold_2750_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2844..3554)
DNA (711bp) protein (237aa)
Short-chain dehydrogenase/reductase SDR Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASU5_RUBXD
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2750_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(3736..4389)
DNA (654bp) protein (218aa)
Two component transcriptional regulator, LuxR family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQK8_9CHLR
LuxR family transcriptional regulator
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2750_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(4386..5576)
DNA (1191bp) protein (397aa)
GAF sensor signal transduction histidine kinase (EC:2.7.3.-)
GAF sensor signal transduction histidine kinase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ASU9_RUBXD
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2750_7
unknown

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5770..5859
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2750_8
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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5856..7115
DNA (1260bp) protein (420aa)
Uncharacterized protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X861_NAKMY
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_170_b1_sep16_scaffold_2750_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(7176..7676)
DNA (501bp) protein (167aa)
Allene oxide cyclase bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b1_sep16_scaffold_2750_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(7796..8863)
DNA (1068bp) protein (356aa)
Probable transcription regulator Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYJ8_THERP
putative transcriptional regulator
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2750_11
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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8912..9139
DNA (228bp) protein (76aa)
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_2750_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(9158..9820)
DNA (663bp) protein (221aa)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2750_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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9853..10932
DNA (1080bp) protein (360aa)
Polysaccharide deacetylase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5P7_SPHTD
polysaccharide deacetylase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2750_14
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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10990..11400
DNA (411bp) protein (137aa)
hypothetical protein Tax=Fischerella muscicola RepID=UPI0002FC1ADE
GCN5 family acetyltransferase {ECO:0000313|EMBL:KIJ73586.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
N-acetyltransferase GCN5
PLM3-1_170_b1_sep16_scaffold_2750_15

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11478..11885
DNA (408bp) protein (136aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00035FBE32
Marine sediment metagenome DNA, contig: S01H1_S10112 {ECO:0000313|EMBL:GAG12697.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_2750_16
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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12025..13308
DNA (1284bp) protein (428aa)
mvaA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34)
3-hydroxy-3-methylglutaryl-coenzyme A reductase bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_2750_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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13392..14453
DNA (1062bp) protein (354aa)
atm:ANT_28810 hydroxymethylglutaryl-coenzyme A synthase family protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hydroxymethylglutaryl-coenzyme A synthase family protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2750_18
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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14600..15418
DNA (819bp) protein (273aa)
Thiolase family protein bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
thiolase family protein
Tax=RBG_16_Chloroflexi_52_11_curated
Displaying 18 items

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