ggKbase home page

PLM3-1_170_b1_sep16_scaffold_2934

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2934_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

2..400
DNA (399bp) protein (133aa)
Photosystem I assembly protein Ycf3 Tax=Microcystis aeruginosa SPC777 RepID=S3J985_MICAE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3-1_170_b1_sep16_scaffold_2934_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

717..1868
DNA (1152bp) protein (384aa)
atm:ANT_15960 dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein (EC:3.1.5.1); K01129 dGTPase [EC:3.1.5.1] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein (EC:3.1.5.1)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2934_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

1987..2457
DNA (471bp) protein (157aa)
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
greA; transcription elongation factor GreA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2934_4
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(2542..3456)
DNA (915bp) protein (305aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_2934_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(3767..6034)
DNA (2268bp) protein (756aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5B1_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2934_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(6031..7146)
DNA (1116bp) protein (372aa)
Mannose-1-phosphate guanylyltransferase bin=GWB2_Chloroflexi_54_36 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
putative nucleotidyl transferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2934_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(7205..8317)
DNA (1113bp) protein (371aa)
cap:CLDAP_39650 putative DNA processing protein; K04096 DNA processing protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative DNA processing protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2934_8
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(8350..8853)
DNA (504bp) protein (168aa)
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
16S rRNA processing protein RimM
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_2934_9
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(8945..9181)
DNA (237bp) protein (79aa)
UPF0109 protein ANT_16030 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_2934_10
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists


comp(9178..9603)
DNA (426bp) protein (142aa)
30S ribosomal protein S16 bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
rpsP; 30S ribosomal protein S16
Tax=RBG_16_Chloroflexi_51_16_curated
PLM3-1_170_b1_sep16_scaffold_2934_11
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists


comp(9708..11033)
DNA (1326bp) protein (442aa)
Signal recognition particle protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5B7_ANATU
ffh; signal recognition particle protein
Tax=RBG_16_Chloroflexi_54_11_curated
PLM3-1_170_b1_sep16_scaffold_2934_12
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

11588..11815
DNA (228bp) protein (76aa)
UniRef90_G8AUY1 Osmosensitive K+ channel signal transduction histidine kinase (Two-component system with KdpE) Tax=Azospirillum brasilense Sp245 RepID=G8AUY1_AZOBR bin=RBG9 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG9 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_2934_13
unknown

Not on your lists

12250..12321
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 13 items

View Taxonomy