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PLM3-1_170_b1_sep16_scaffold_402

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_402_1
unknown

Not on your lists

comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_402_2
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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comp(292..921)
DNA (630bp) protein (210aa)
Peptidyl-prolyl cis-trans isomerase B Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0IA07_CALAS
ppiB; peptidyl-prolyl cis-trans isomerase B
Tax=RBG_16_Chloroflexi_48_8_curated
PLM3-1_170_b1_sep16_scaffold_402_3
unknown

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comp(936..1730)
DNA (795bp) protein (265aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_402_4
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

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comp(1730..2920)
DNA (1191bp) protein (397aa)
Uncharacterized protein Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CUY5_TRURR
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
PLM3-1_170_b1_sep16_scaffold_402_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2992..3432)
DNA (441bp) protein (147aa)
Putative PAS/PAC sensor protein Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W1V8_DESAS
putative PAS/PAC sensor protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_402_6
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(3429..4295)
DNA (867bp) protein (289aa)
PAS domain S-box/uncharacterized domain HDIG bin=RBG_19FT_COMBO_GAL15_69_19 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
putative PAS/PAC sensor protein
Tax=BJP_IG2158_Anaerolineales_38_74
PLM3-1_170_b1_sep16_scaffold_402_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(4386..4829)
DNA (444bp) protein (148aa)
PAS domain S-box bin=GWC2_Nitrospirae_57_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
multi-sensor signal transduction histidine kinase
Tax=GWC2_Nitrospirae_57_13_curated
PLM3-1_170_b1_sep16_scaffold_402_8

Not on your lists

5227..8331
DNA (3105bp) protein (1035aa)
type ii site-specific deoxyribonuclease (EC:3.1.21.4)
restriction endonuclease subunit M Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B6C920
Probable DNA methylase {ECO:0000313|EMBL:CBH38125.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
PLM3-1_170_b1_sep16_scaffold_402_9
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8750..9166
DNA (417bp) protein (139aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPX6_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU59622.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3-1_170_b1_sep16_scaffold_402_10
unknown

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9209..9364
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_402_11
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9570..10388
DNA (819bp) protein (273aa)
Adenylate/guanylate cyclase Tax=Rhizobium grahamii CCGE 502 RepID=S3I4M1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJS30887.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
adenylate/guanylate cyclase protein
PLM3-1_170_b1_sep16_scaffold_402_12
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10518..11432
DNA (915bp) protein (305aa)
Aminoglycoside phosphotransferase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AYB9_STRRD
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACZ87129.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3-1_170_b1_sep16_scaffold_402_13
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11444..11857
DNA (414bp) protein (138aa)
Type II site-specific deoxyribonuclease Tax=Methanolinea tarda NOBI-1 RepID=G6FGG9_9EURY
type II site-specific deoxyribonuclease
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM3-1_170_b1_sep16_scaffold_402_14
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12080..13009)
DNA (930bp) protein (310aa)
id=14425208 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3-1_170_b1_sep16_scaffold_402_15
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

13309..15162
DNA (1854bp) protein (618aa)
hypothetical protein Tax=Balneola vulgaris RepID=UPI000370ACAE
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_402_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(15312..16721)
DNA (1410bp) protein (470aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C272_DESTA
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_402_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(16891..18255)
DNA (1365bp) protein (455aa)
atm:ANT_18690 RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
RNA polymerase sigma factor
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_402_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(18427..19032)
DNA (606bp) protein (202aa)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_402_19
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(19177..20838)
DNA (1662bp) protein (554aa)
Hypothetical membrane protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N629_ANATU
hypothetical protein
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_402_20
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(20835..21566)
DNA (732bp) protein (244aa)
Putative ABC transporter permease protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N628_ANATU
ABC transporter permease
Tax=RBG_16_Chloroflexi_64_43_curated
Displaying 20 items

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