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PLM3-1_170_b1_sep16_scaffold_526

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_526_1
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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3..647
DNA (645bp) protein (215aa)
Trimethylamine methyltransferase Tax=Thermincola potens (strain JR) RepID=D5X8V3_THEPJ
trimethylamine methyltransferase
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_526_2
R_NC10_66_22, NC10, Bacteria

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795..1577
DNA (783bp) protein (261aa)
FAD dependent oxidoreductase bin=bin8_Chloro species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
folate-binding protein YgfZ
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b1_sep16_scaffold_526_3
R_NC10_66_22, NC10, Bacteria

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1525..3132
DNA (1608bp) protein (536aa)
Glycine cleavage system T protein bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
glycine cleavage system protein T
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b1_sep16_scaffold_526_4
unknown

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comp(3432..3680)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_526_5
unknown

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comp(3694..4884)
DNA (1191bp) protein (397aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_526_6

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5267..6874
DNA (1608bp) protein (536aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL61643.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_526_7
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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6936..8543
DNA (1608bp) protein (536aa)
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=BJP_IG2069_Anaerolineales_43_63
PLM3-1_170_b1_sep16_scaffold_526_8
unknown

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8692..9360
DNA (669bp) protein (223aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_526_9
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9471..10718
DNA (1248bp) protein (416aa)
Aminotransferase, classes I and II Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08T08_STIAD
class I and II family aminotransferase
Aminotransferase, classes I and II {ECO:0000313|EMBL:ADO72028.1}; Transaminase {ECO:0000313|EMBL:EAU63619.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3-1_170_b1_sep16_scaffold_526_10
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10751..11989)
DNA (1239bp) protein (413aa)
allantoate amidohydrolase (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase {ECO:0000313|EMBL:ABA57294.1}; EC=3.5.1.87 {ECO:0000313|EMBL:ABA57294.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
Amidase, hydantoinase/carbamoylase Tax=Nitrosococcus oceani RepID=Q3JD02_NITOC
PLM3-1_170_b1_sep16_scaffold_526_11
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12061..12525)
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4E2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KIL37457.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.;" source="Cohnella sp. VKM B-2846.;"
beta-lactamase domain-containing protein
PLM3-1_170_b1_sep16_scaffold_526_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12588..13592)
DNA (1005bp) protein (335aa)
Putative NAD-dependent epimerase/dehydratase Tax=Rhizobium loti RepID=M5ANU5_RHILI
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:CDX58881.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
NAD-dependent epimerase/dehydratase
PLM3-1_170_b1_sep16_scaffold_526_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(13748..14440)
DNA (693bp) protein (231aa)
Hypothetical conserved protein Tax=uncultured Chloroflexi bacterium RepID=H5SHM1_9CHLR
N-acetyltransferase GCN5
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_526_14
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14626..16116
DNA (1491bp) protein (497aa)
Glucosyltransferase MdoH {ECO:0000313|EMBL:EDP65088.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDP65088.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Glucosyltransferase MdoH Tax=alpha proteobacterium BAL199 RepID=A8TQL8_9PROT
monomeric sarcosine oxidase
PLM3-1_170_b1_sep16_scaffold_526_15
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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16288..16980
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZZT3_9ACTN
hypothetical protein
Tax=CG_Anaero_02
PLM3-1_170_b1_sep16_scaffold_526_16

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17235..18896
DNA (1662bp) protein (554aa)
ABC transporter substrate-binding protein Tax=Desulfospira joergensenii RepID=UPI0003B51781
Uncharacterized protein {ECO:0000313|EMBL:KKL68226.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative ABC transporter substrate binding protein
PLM3-1_170_b1_sep16_scaffold_526_17
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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19072..20376
DNA (1305bp) protein (435aa)
Dipeptide transport system permease protein DppB Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FQD3_9DELT
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:EMS77278.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
ABC transporter permease
PLM3-1_170_b1_sep16_scaffold_526_18
unknown

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20551..20679
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 18 items

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