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PLM3-1_170_b1_sep16_scaffold_556

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_556_1
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1..516
DNA (516bp) protein (172aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI00037020C5
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:EKQ66802.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
ABC transporter permease
PLM3-1_170_b1_sep16_scaffold_556_2
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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520..1491
DNA (972bp) protein (324aa)
Putative ABC-type transport system, permease component Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GH43_9CYAN
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:EKQ66801.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
inner-membrane translocator
PLM3-1_170_b1_sep16_scaffold_556_3
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1611..3140
DNA (1530bp) protein (510aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IHE0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO79393.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_556_4
bacterium UASB270, Bacteria

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3124..3840
DNA (717bp) protein (239aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JAW9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:GAK55793.1}; species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_556_5
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4114..4683
DNA (570bp) protein (190aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:ACY15997.1}; EC=3.2.2.21 {ECO:0000313|EMBL:ACY15997.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
DNA-3-methyladenine glycosylase II Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LW65_HALO1
PLM3-1_170_b1_sep16_scaffold_556_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4638..5612
DNA (975bp) protein (325aa)
NAD-dependent epimerase/dehydratase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HHP1_ANADF
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3-1_170_b1_sep16_scaffold_556_7
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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comp(5689..6447)
DNA (759bp) protein (253aa)
translocation protein TolB Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5D383
tolB; protein tolB
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3-1_170_b1_sep16_scaffold_556_8
unknown

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6464..6709
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_556_9
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(6755..6913)
DNA (159bp) protein (53aa)
CBS domain protein bin=GWB1_Deltaproteobacteria_rel_55_8 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB1_Bdellovibrionales_55_8_curated
PLM3-1_170_b1_sep16_scaffold_556_10
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7062..7319)
DNA (258bp) protein (86aa)
Transglycosylase Tax=Sphingobium baderi LL03 RepID=T0HSX6_9SPHN
Transglycosylase {ECO:0000313|EMBL:EQB02400.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
transglycosylase
PLM3-1_170_b1_sep16_scaffold_556_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(7552..7809)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TE81_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH88454.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_556_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(8033..8743)
DNA (711bp) protein (237aa)
Rhomboid family protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4P5_SPHTD
rhomboid family protein
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3-1_170_b1_sep16_scaffold_556_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(8847..9095)
DNA (249bp) protein (83aa)
CsbD family protein bin=GWB2_Chloroflexi_54_36 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
CsbD family protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_556_14
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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comp(9354..9986)
DNA (633bp) protein (211aa)
response regulator bin=bin3_NC10 species=unknown genus=unknown taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
response regulator
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3-1_170_b1_sep16_scaffold_556_15
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(9979..10488)
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0S3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH82413.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_556_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

10713..12353
DNA (1641bp) protein (547aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI000375239E
Extracellular solute-binding protein, family 5 precursor
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_556_17
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

12383..13273
DNA (891bp) protein (297aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component bin=bin9_gal15 species=Deinococcus apachensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
Binding-protein-dependent transport systems inner membrane component
Tax=CSP1_3_Armatimonadetes
PLM3-1_170_b1_sep16_scaffold_556_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

13277..14206
DNA (930bp) protein (310aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI0003713B7D
binding-protein-dependent transport systems inner membrane component
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_556_19
Thermus sp. O-3-1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

14229..15161
DNA (933bp) protein (311aa)
Formamidase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Amidase {ECO:0000313|EMBL:BAL49703.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. O-3-1.;"
acetamidase/formamidase
PLM3-1_170_b1_sep16_scaffold_556_20
unknown

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comp(15317..15466)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_556_21
Pongo abelii, Pongo, Primates, Mammalia, Chordata, Metazoa

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comp(15618..16301)
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Pongo abelii RepID=K7ETQ2_PONAB
Uncharacterized protein {ECO:0000313|Ensembl:ENSPPYP00000023925}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo.;" source="Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_556_22
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16484..17353)
DNA (870bp) protein (290aa)
hypothetical protein Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036FF722
O-linked N-acetylglucosamine transferase, SPINDLY family
O-linked N-acetylglucosamine transferase, SPINDLY family {ECO:0000313|EMBL:BAP55002.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
PLM3-1_170_b1_sep16_scaffold_556_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17350..19215)
DNA (1866bp) protein (622aa)
ABC transporter related Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CW5_SOLUE
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABJ81101.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_556_24
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19292..21634)
DNA (2343bp) protein (781aa)
Glycosyl transferase group 1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNE1_9GAMM
Glycosyl transferase group 1 {ECO:0000313|EMBL:CDQ09163.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
group 1 glycosyl transferase
PLM3-1_170_b1_sep16_scaffold_556_25
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21631..22029)
DNA (399bp) protein (133aa)
KanE_2 protein {ECO:0000313|EMBL:KIT16852.1}; EC=2.4.1.301 {ECO:0000313|EMBL:KIT16852.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;"
Glycosyltransferase Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QR20_NOSS7
glycosyltransferase
Displaying 25 items

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