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PLM3-1_170_b1_sep16_scaffold_588

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_588_1
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..636)
DNA (636bp) protein (212aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=GATA_CHLAD
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_588_2
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(702..1478)
DNA (777bp) protein (259aa)
Uncharacterized protein Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHR5_THEBM
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
PLM3-1_170_b1_sep16_scaffold_588_3
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(1475..1795)
DNA (321bp) protein (107aa)
Glutamyl-tRNA(Gln) amidotransferase subunit C Tax=Paenibacillus dendritiformis C454 RepID=H3SGG3_9BACL bin=RBG9 species=Paenibacillus dendritiformis genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG9 organism_group=Chloroflexi
gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_588_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

2032..3063
DNA (1032bp) protein (344aa)
atm:ANT_25070 hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hrcA; heat-inducible transcription repressor HrcA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_588_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

3110..3697
DNA (588bp) protein (196aa)
grpE; protein GrpE; K03687 molecular chaperone GrpE bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
grpE; protein GrpE
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_588_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

3795..5702
DNA (1908bp) protein (636aa)
dnaK; chaperone protein DnaK
atm:ANT_25050 dnaK; chaperone protein DnaK; K04043 molecular chaperone DnaK bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_588_7
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

5781..6674
DNA (894bp) protein (298aa)
atm:ANT_25040 dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
dnaJ; chaperone protein DnaJ
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_588_8
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

6619..6918
DNA (300bp) protein (100aa)
atm:ANT_25040 dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
dnaJ; chaperone protein DnaJ
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_588_9
unknown

Not on your lists

comp(6924..7049)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_588_10
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7085..7642
DNA (558bp) protein (186aa)
tRNA/rRNA methyltransferase (SpoU), partial bin=GWB2_Bacteroidetes_32_14 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
tRNA/rRNA methyltransferase (spou)
Tax=GWF2_Bacteroidetes_38_335_curated
PLM3-1_170_b1_sep16_scaffold_588_11
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

8122..9222
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Prevotella nanceiensis RepID=UPI000366B188
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
PLM3-1_170_b1_sep16_scaffold_588_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9334..10116
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TXH3_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EMI50281.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_588_13
unknown

Not on your lists

10275..11684
DNA (1410bp) protein (470aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_588_14
unknown

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11988..12110
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_588_15
unknown

Not on your lists

12138..13145
DNA (1008bp) protein (336aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_588_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13313..13897
DNA (585bp) protein (195aa)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EDY19700.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EDY19700.1};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I Tax=Chthoniobacter flavus Ellin428 RepID=B4D1T8_9BACT
PLM3-1_170_b1_sep16_scaffold_588_17
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14105..14746
DNA (642bp) protein (214aa)
nitrile hydratase subunit alpha (EC:4.2.1.84)
Nitrile hydratase, alpha subunit {ECO:0000313|EMBL:ADU72718.1}; EC=4.2.1.84 {ECO:0000313|EMBL:ADU72718.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
Nitrile hydratase, alpha subunit Tax=Pantoea sp. (strain At-9b) RepID=E6WMT3_PANSA
PLM3-1_170_b1_sep16_scaffold_588_18
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14746..15417
DNA (672bp) protein (224aa)
nitrile hydratase (EC:4.2.1.84)
Nitrile hydratase Tax=alpha proteobacterium BAL199 RepID=A8TJA1_9PROT
Nitrile hydratase {ECO:0000313|EMBL:EDP66708.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
PLM3-1_170_b1_sep16_scaffold_588_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15428..15799
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136L3_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE39976.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
PLM3-1_170_b1_sep16_scaffold_588_20
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

16169..16402
DNA (234bp) protein (78aa)
Transcription regulator AsnC-type, C-terminal 7..76 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_588_21
unknown

Not on your lists

comp(16395..16616)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_588_22
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16870..17961
DNA (1092bp) protein (364aa)
Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BUQ2_9GAMM
type 11 methyltransferase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM3-1_170_b1_sep16_scaffold_588_23
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

18013..18285
DNA (273bp) protein (91aa)
glyoxalase/Bleomycin resistance protein bin=bin9_gal15 species=Pseudoalteromonas spongiae genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_588_24

Not on your lists

18431..18943
DNA (513bp) protein (171aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IF28_9CHLR
DinB superfamily {ECO:0000313|EMBL:AIA13471.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_588_25
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

19131..19763
DNA (633bp) protein (211aa)
adenylate cyclase (EC:4.6.1.-) bin=bin9_gal15 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
family 3 adenylate cyclase
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_588_26
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

19823..20593
DNA (771bp) protein (257aa)
Amidinotransferase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ56_KORVE
amidinotransferase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_588_27
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

20649..21155
DNA (507bp) protein (169aa)
id=14628495 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
PLM3-1_170_b1_sep16_scaffold_588_28
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(21246..21635)
DNA (390bp) protein (130aa)
hypothetical protein OsccyDRAFT_2874 bin=GWF2_Lentisphaerae_49_21 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
HEPN domain-containing protein
Tax=CG_Anaero_04
PLM3-1_170_b1_sep16_scaffold_588_29
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(21598..21987)
DNA (390bp) protein (130aa)
DNA polymerase subunit beta
DNA polymerase beta domain protein region bin=GWA2_Elusimicrobia_51_34 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_588_30
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(22191..22961)
DNA (771bp) protein (257aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3G1_ANATU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ62975.1}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Displaying items 1-30 of 32 in total

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