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PLM3-1_170_b1_sep16_scaffold_667

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_667_1
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(60..971)
DNA (912bp) protein (304aa)
oxidoreductase Tax=Pseudomonas pelagia RepID=UPI00039DF965
Uncharacterized protein {ECO:0000313|EMBL:KIL40335.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_667_2
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1198..1581
DNA (384bp) protein (128aa)
hypothetical protein Tax=Streptomyces RepID=UPI00037F46C2
Endoribonuclease L-PSP {ECO:0000313|EMBL:KIL38527.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
translation initiation inhibitor
PLM3-1_170_b1_sep16_scaffold_667_3
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

1599..2648
DNA (1050bp) protein (350aa)
Alanine racemase domain protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NGT7_ROSCS
alanine racemase
Alanine racemase domain protein {ECO:0000313|EMBL:ABU56684.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3-1_170_b1_sep16_scaffold_667_4
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(2777..3907)
DNA (1131bp) protein (377aa)
Putative ABC transporter substrate binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9W2_CALAS
putative ABC transporter substrate binding protein
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:BAM02050.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_170_b1_sep16_scaffold_667_5
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(4178..4870)
DNA (693bp) protein (231aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ABQ91100.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ABQ91100.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Monosaccharide-transporting ATPase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWU7_ROSS1
PLM3-1_170_b1_sep16_scaffold_667_6
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(4863..5930)
DNA (1068bp) protein (356aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ABY35497.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ABY35497.1};; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
Monosaccharide-transporting ATPase Tax=Chloroflexus RepID=A9WGG5_CHLAA
PLM3-1_170_b1_sep16_scaffold_667_7
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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comp(5927..7456)
DNA (1530bp) protein (510aa)
Putative ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9W5_CALAS
putative ABC transporter ATP-binding protein
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3-1_170_b1_sep16_scaffold_667_8

Not on your lists

comp(7462..8544)
DNA (1083bp) protein (361aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PSZ5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGA14147.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
putative oxidoreductase
PLM3-1_170_b1_sep16_scaffold_667_9
unknown

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8574..8957
DNA (384bp) protein (128aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_667_10
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8784..9137)
DNA (354bp) protein (118aa)
L-rhamnose mutarotase Tax=Streptomyces sp. TOR3209 RepID=UPI0002EF991A
L-rhamnose 1-epimerase {ECO:0000313|EMBL:EDY58120.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_667_11
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(9134..9481)
DNA (348bp) protein (116aa)
Cupin superfamily barrel domain protein Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A1V9_PELCD
cupin
Tax=RBG_16_Chloroflexi_48_8_curated
PLM3-1_170_b1_sep16_scaffold_667_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9486..10628)
DNA (1143bp) protein (381aa)
Pyruvate/2-oxoglutarate dehydrogenase complex,dihydrolipoamide acyltransferase (E2) component, and related enzymes (EC:2.3.1.12)
dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex bin=GWC2_Deltaproteobacteria_66_88 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM3-1_170_b1_sep16_scaffold_667_13
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(10662..11801)
DNA (1140bp) protein (380aa)
Mandelate racemase/muconate lactonizing enzyme Tax=marine actinobacterium PHSC20C1 RepID=A4AFX2_9ACTN
mandelate racemase/muconate lactonizing protein
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3-1_170_b1_sep16_scaffold_667_14
Oceanobacillus picturae, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11903..12862)
DNA (960bp) protein (320aa)
Acetoin dehydrogenase (TPP-dependent) alpha chain Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KES3_BACHD
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha {ECO:0000313|EMBL:CDO03529.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus picturae.;"
acetoin dehydrogenase subunit alpha
PLM3-1_170_b1_sep16_scaffold_667_15
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(12947..13924)
DNA (978bp) protein (326aa)
pdhB; protein PdhB (EC:1.2.4.1)
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta Tax=Desulfobacter curvatus RepID=UPI00037E54C2
Tax=Caldatribacterium saccharofermentans
PLM3-1_170_b1_sep16_scaffold_667_16
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13931..15055)
DNA (1125bp) protein (375aa)
Mandelate racemase/muconate lactonizing protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCI2_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KIF42987.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
mandelate racemase/muconate lactonizing protein
PLM3-1_170_b1_sep16_scaffold_667_17

Not on your lists

comp(15087..15833)
DNA (747bp) protein (249aa)
Marine sediment metagenome DNA, contig: S12H4_S01243 {ECO:0000313|EMBL:GAI97058.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
3-oxoacyl-(Acyl-carrier-protein) reductase bin=GWA1_Treponema_62_8 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
short chain dehydrogenase family protein
PLM3-1_170_b1_sep16_scaffold_667_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15911..16672)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035DB57E
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ADB50360.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_170_b1_sep16_scaffold_667_19
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17020..18276)
DNA (1257bp) protein (419aa)
Mandelate racemase/muconate lactonizing protein Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A0U9_MAHA5
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AEE96995.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
mandelate racemase
PLM3-1_170_b1_sep16_scaffold_667_20
RLO_PLX_64_10, Bacteria

Not on your lists

comp(18441..19748)
DNA (1308bp) protein (436aa)
mandelate racemase Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B414C1
mandelate racemase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b1_sep16_scaffold_667_21
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19745..20566)
DNA (822bp) protein (274aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003751993
Uncharacterized protein {ECO:0000313|EMBL:EJY54970.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-3-68.;"
Demethylmenaquinone methyltransferase
PLM3-1_170_b1_sep16_scaffold_667_22
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(20705..21184)
DNA (480bp) protein (160aa)
Transcriptional regulator, MerR family bin=GWC2_Chloroflexi_73_18 species=unknown genus=Salinispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
transcriptional activator ligand binding domain-containing protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b1_sep16_scaffold_667_23
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21204..21542)
DNA (339bp) protein (113aa)
galE1; UDP-glucose 4-epimerase (EC:5.1.3.2)
hypothetical protein Tax=Kaistia granuli RepID=UPI00037D6617
Uncharacterized protein {ECO:0000313|EMBL:KKC32252.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
PLM3-1_170_b1_sep16_scaffold_667_24
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(21975..22838)
DNA (864bp) protein (288aa)
Hydrolase CocE/NonD family protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLN1_9CHLR
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:EFH86681.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
X-Pro dipeptidyl-peptidase-like protein
PLM3-1_170_b1_sep16_scaffold_667_25
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(22787..23704)
DNA (918bp) protein (306aa)
Hydrolase CocE/NonD family protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLN1_9CHLR
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:EFH86681.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
X-Pro dipeptidyl-peptidase
PLM3-1_170_b1_sep16_scaffold_667_26
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23741..24652)
DNA (912bp) protein (304aa)
Mannonate dehydratase {ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|SAAS:SAAS00189414};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036ED545
mannonate dehydratase related protein
PLM3-1_170_b1_sep16_scaffold_667_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24776..25567)
DNA (792bp) protein (264aa)
short-chain dehydrogenase/reductase (EC:1.-.-.-)
Oxidoreductase, short chain dehydrogenase/reductase family protein Tax=Parabacteroides merdae RepID=A7AA78_9PORP
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDN88535.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
PLM3-1_170_b1_sep16_scaffold_667_28
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(25617..26207)
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AVP2_HERA2
hypothetical protein
Tax=CG_Anaero_04
Displaying 28 items

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