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PLM3-1_170_b1_sep16_scaffold_721

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_721_1
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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2..169
DNA (168bp) protein (56aa)
GTP-binding protein TypA/BipA Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N563_ANATU
typA; GTP-binding protein TypA/BipA
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:BAJ63577.1}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
PLM3-1_170_b1_sep16_scaffold_721_2
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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234..1214
DNA (981bp) protein (327aa)
Homocysteine S-methyltransferase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R929_PIRSD
homocysteine S-methyltransferase
Homocysteine S-methyltransferase {ECO:0000313|EMBL:ADB15856.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
PLM3-1_170_b1_sep16_scaffold_721_3
unknown

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1485..2123
DNA (639bp) protein (213aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_721_4
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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2344..4275
DNA (1932bp) protein (644aa)
putative adenylate cyclase (EC:4.6.1.1)
Putative adenylate cyclase {ECO:0000313|EMBL:BAJ62955.1}; EC=4.6.1.1 {ECO:0000313|EMBL:BAJ62955.1};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Putative adenylate cyclase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3E1_ANATU
PLM3-1_170_b1_sep16_scaffold_721_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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4278..5441
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIM9_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28501.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3-1_170_b1_sep16_scaffold_721_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(5501..6241)
DNA (741bp) protein (247aa)
Peptidase S58 DmpA Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C570_SPHTD
peptidase S58 DmpA
Peptidase S58 DmpA {ECO:0000313|EMBL:ACZ39387.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3-1_170_b1_sep16_scaffold_721_7
Anaerobaculum hydrogeniformans, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(6257..6658)
DNA (402bp) protein (134aa)
Peptidase family T4 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L1J2_9BACT
Peptidase family T4 {ECO:0000313|EMBL:EFD25016.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum hydrogeniformans ATCC BAA-1850.;"
peptidase S58 DmpA
PLM3-1_170_b1_sep16_scaffold_721_8
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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6963..7304
DNA (342bp) protein (114aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_721_9
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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7406..9424
DNA (2019bp) protein (673aa)
FeS reductase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_721_10
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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9512..9754
DNA (243bp) protein (81aa)
Transcriptional regulator/antitoxin, MazE bin=GWB2_Chloroflexi_54_36 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
transcriptional regulator/antitoxin MazE
Tax=CG_Anaero_04
PLM3-1_170_b1_sep16_scaffold_721_11
unknown

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11022..11612
DNA (591bp) protein (197aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_721_12
unknown

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11623..12021
DNA (399bp) protein (133aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_721_13
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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12242..12502
DNA (261bp) protein (87aa)
Tax=CG_Anaero_04
PLM3-1_170_b1_sep16_scaffold_721_14

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12574..12873
DNA (300bp) protein (100aa)
Marine sediment metagenome DNA, contig: S01H1_S31688 {ECO:0000313|EMBL:GAG29706.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein bin=GWA2_OP3_52_12 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_721_15
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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13009..13785
DNA (777bp) protein (259aa)
hypothetical protein Tax=Streptomyces sp. MspMP-M5 RepID=UPI00035E336F
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3-1_170_b1_sep16_scaffold_721_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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13828..14202
DNA (375bp) protein (125aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_721_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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14358..14606
DNA (249bp) protein (83aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SR37_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_721_18
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

14599..15057
DNA (459bp) protein (153aa)
hypothetical protein Tax=Anabaena sp. PCC 7108 RepID=UPI00037316C1
PilT protein domain protein {ECO:0000313|EMBL:KIF29805.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
PilT protein domain protein
PLM3-1_170_b1_sep16_scaffold_721_19
RLO_PLX_64_10, Bacteria

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15054..15644
DNA (591bp) protein (197aa)
G/U mismatch-specific uracil-DNA glycosylase Tax=Gloeocapsa sp. PCC 7428 RepID=K9XEI1_9CHRO
Uracil-DNA glycosylase superfamily
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b1_sep16_scaffold_721_20
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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15784..16305
DNA (522bp) protein (174aa)
Acetyltransferase Tax=Thermoplasmatales archaeon A-plasma RepID=T0M373_9EURY
acetyltransferase
Tax=GWC2_Geobacteraceae_58_44_curated
PLM3-1_170_b1_sep16_scaffold_721_21
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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16444..17538
DNA (1095bp) protein (365aa)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_721_22
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

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17531..18409
DNA (879bp) protein (293aa)
Transketolase central region bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
transketolase
Tax=GWC2_Chloroflexi_49_37_curated
Displaying 22 items

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