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PLM3-1_170_b1_sep16_scaffold_1007

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1007_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3..1094)
DNA (1092bp) protein (364aa)
ial:IALB_2207 ftsW; Cell division membrane protein FtsW; K03588 cell division protein FtsW bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
ftsW; cell division membrane protein FtsW
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1007_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1094..2440)
DNA (1347bp) protein (449aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1007_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(2442..3551)
DNA (1110bp) protein (370aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
mraY; UDP-N-acetylmuramyl pentapeptide phosphotransferase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1007_4
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3552..4940)
DNA (1389bp) protein (463aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
murF; UDP-N-acetylmuramyl pentapeptide synthase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1007_5
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4937..6406)
DNA (1470bp) protein (490aa)
ial:IALB_2211 murE; UDP-N-acetylmuramyl tripeptide synthase; K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
murE; UDP-N-acetylmuramyl tripeptide synthase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_6
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(6406..7419)
DNA (1014bp) protein (338aa)
Cell division protein FtsI bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
ftsI; cell division protein FtsI
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b1_sep16_scaffold_1007_7
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7413..8252)
DNA (840bp) protein (280aa)
ial:IALB_2212 ftsI; cell division protein FtsI; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
ftsI; cell division protein FtsI
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_8
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8245..8601)
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALQ9_IGNAJ
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_9
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(8598..9521)
DNA (924bp) protein (308aa)
Ribosomal RNA small subunit methyltransferase H bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
S-adenosylmethionine-dependent methyltransferase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_10
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9524..9958)
DNA (435bp) protein (145aa)
Protein MraZ Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALR1_IGNAJ
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_trna_1
unknown

Not on your lists

comp(10318..10390)
DNA (73bp)
transferRNA Thr
PLM3-1_170_b1_sep16_scaffold_1007_11
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10611..11474)
DNA (864bp) protein (288aa)
TPR repeat protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
PLM3-1_170_b1_sep16_scaffold_1007_12
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11483..11779)
DNA (297bp) protein (99aa)
Nucleoid DNA-binding protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
histone family protein DNA-binding protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_13
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11967..14795)
DNA (2829bp) protein (943aa)
PAS:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A-like protein bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
PAS:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A-like protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_14
unknown

Not on your lists

comp(14811..15161)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1007_15
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15410..16633)
DNA (1224bp) protein (408aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_16
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17001..17645)
DNA (645bp) protein (215aa)
Sterol desaturase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AL81_IGNAJ
Sterol desaturase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1007_17
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(17880..19280)
DNA (1401bp) protein (467aa)
6-Phosphofructokinase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
pfk; 6-Phosphofructokinase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1007_18
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(19476..21659)
DNA (2184bp) protein (728aa)
Superfamily I DNA/RNA helicase bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
pcrA; Superfamily I DNA/RNA helicase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1007_19
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

22213..22710
DNA (498bp) protein (166aa)
Ferritin-like protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJ22_IGNAJ
Ferritin-like protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1007_20
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22752..23618)
DNA (867bp) protein (289aa)
NADH dehydrogenase I subunit F bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
nuoF; NADH dehydrogenase I subunit F
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_21
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(23654..24022)
DNA (369bp) protein (123aa)
NADH dehydrogenase I subunit F bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
nuoF; NADH dehydrogenase I subunit F
Tax=CG_Ignavi_02
PLM3-1_170_b1_sep16_scaffold_1007_22
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(24022..24504)
DNA (483bp) protein (161aa)
NADH dehydrogenase I subunit E Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALG7_IGNAJ
nuoE; NADH dehydrogenase I subunit E
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_23
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(24548..24952)
DNA (405bp) protein (135aa)
Ribosomal protein S23 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALG8_IGNAJ
30S ribosomal protein S23
Ribosomal protein S23 {ECO:0000313|EMBL:AFH49825.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b1_sep16_scaffold_1007_24
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(25035..26291)
DNA (1257bp) protein (419aa)
NADH-quinone oxidoreductase subunit D Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALG9_IGNAJ
nuoD; NADH dehydrogenase I subunit D
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_25
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(26298..26792)
DNA (495bp) protein (165aa)
nuoC; NADH dehydrogenase I subunit C; K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
nuoC; NADH dehydrogenase I subunit C
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
PLM3-1_170_b1_sep16_scaffold_1007_26
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(26795..27316)
DNA (522bp) protein (174aa)
NADH-quinone oxidoreductase subunit B bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
nuoB; NADH dehydrogenase I subunit B
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_1007_27
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(27307..27675)
DNA (369bp) protein (123aa)
NADH-quinone oxidoreductase subunit A bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
nuoA; NADH dehydrogenase I subunit A
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1007_28
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27855..28619
DNA (765bp) protein (255aa)
Fibronectin type III domain-containing protein bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Fibronectin type III domain-containing protein
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 29 items

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