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PLM3-1_170_b1_sep16_scaffold_1849

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1849_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..1458
DNA (1458bp) protein (486aa)
IgA Peptidase M64 superfamily bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
MEROPS family M64 IgA peptidase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1849_2
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1689..2429
DNA (741bp) protein (247aa)
DNA-directed RNA polymerase sigma subunit Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0APE6_IGNAJ
rpoD; DNA-directed RNA polymerase sigma subunit
Tax=RBG_16_Ignavibacteria_36_9_curated
PLM3-1_170_b1_sep16_scaffold_1849_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2598..3002
DNA (405bp) protein (135aa)
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1849_4
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3237..3497)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANA3_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1849_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3665..4303)
DNA (639bp) protein (213aa)
Response regulator Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANA4_IGNAJ
response regulator
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1849_6
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4376..4861)
DNA (486bp) protein (162aa)
ial:IALB_2759 Putative periplasmic ligand-binding sensor domain protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
periplasmic ligand-binding sensor domain-containing protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1849_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4970..7615)
DNA (2646bp) protein (882aa)
Putative periplasmic ligand-binding sensor domain protein bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
response regulator receiver domain-containing protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1849_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7916..8989)
DNA (1074bp) protein (358aa)
Uncharacterized protein Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AMM1_FLELS
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_1849_9
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9208..9471
DNA (264bp) protein (88aa)
Excinuclease abc c subunit domain protein Tax=Melioribacter roseus (strain P3M) RepID=I7A6E5_MELRP
excinuclease abc c subunit domain protein
Excinuclease abc c subunit domain protein {ECO:0000313|EMBL:AFN75436.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
PLM3-1_170_b1_sep16_scaffold_1849_trna_1
unknown

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9450..9536
DNA (87bp)
transferRNA Ser
PLM3-1_170_b1_sep16_scaffold_1849_10
unknown

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9680..10204
DNA (525bp) protein (175aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1849_11
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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10250..12556
DNA (2307bp) protein (769aa)
TonB-dependent receptor plug Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ59_CHLT3
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACF13752.1}; Flags: Precursor;; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
PLM3-1_170_b1_sep16_scaffold_1849_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(12888..13079)
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXJ6_NITHN
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 13 items

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