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PLM3-1_170_b1_sep16_scaffold_2428

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2428_1
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..1815
DNA (1815bp) protein (605aa)
Uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hemagglutinin domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3-1_170_b1_sep16_scaffold_2428_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2011..4851
DNA (2841bp) protein (947aa)
Outer membrane receptor protein bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Outer membrane receptor protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3-1_170_b1_sep16_scaffold_2428_3
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4962..8147
DNA (3186bp) protein (1062aa)
Uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3-1_170_b1_sep16_scaffold_2428_4
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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8191..9330
DNA (1140bp) protein (380aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3-1_170_b1_sep16_scaffold_2428_5
unknown

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9376..9681
DNA (306bp) protein (102aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2428_6
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9624..10868
DNA (1245bp) protein (415aa)
Tax=CG_Ignavi_02
PLM3-1_170_b1_sep16_scaffold_2428_7
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10969..11394
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Streptomyces albulus CCRC 11814 RepID=S0HLZ4_STRA9
MFS transporter
MFS transporter {ECO:0000313|EMBL:AJF69342.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM3-1_170_b1_sep16_scaffold_2428_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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11475..12299
DNA (825bp) protein (275aa)
Major facilitator superfamily MFS_1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ77_9BACT
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EEF60115.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative major facilitator superfamily transporter
PLM3-1_170_b1_sep16_scaffold_2428_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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12396..13790
DNA (1395bp) protein (465aa)
FAD dependent oxidoreductase Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMY0_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:EEQ59374.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
FAD dependent oxidoreductase
PLM3-1_170_b1_sep16_scaffold_2428_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13800..14378
DNA (579bp) protein (193aa)
Pyridine nucleotide-disulfide oxidoreductase Tax=Eubacterium RepID=C0EWG8_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDB18284.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
FAD binding domain protein
PLM3-1_170_b1_sep16_scaffold_2428_11
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14423..14689
DNA (267bp) protein (89aa)
hypothetical protein Tax=[Clostridium] glycolicum RepID=UPI0003791845
Thioredoxin reductase {ECO:0000313|EMBL:AKI00536.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
oxidoreductase
PLM3-1_170_b1_sep16_scaffold_2428_12
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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14740..14988
DNA (249bp) protein (83aa)
Putative FG-GAP repeat protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
PLM3-1_170_b1_sep16_scaffold_2428_13

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15033..16490
DNA (1458bp) protein (486aa)
alkaline phosphatase D-related protein; K01113 alkaline phosphatase D [EC:3.1.3.1] bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
Marine sediment metagenome DNA, contig: S06H3_S04561 {ECO:0000313|EMBL:GAI27015.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alkaline phosphatase
PLM3-1_170_b1_sep16_scaffold_2428_14
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(16919..17716)
DNA (798bp) protein (266aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_2428_15
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(17713..19551)
DNA (1839bp) protein (613aa)
Glycosidase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
glycosidase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_2428_16
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(19596..19802)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJI0_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 16 items

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