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PLM3-1_170_b1_sep16_scaffold_29592

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_29592_1

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1..438
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM20505.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
exosome complex RNA-binding protein Rrp42
PLM3-1_170_b1_sep16_scaffold_29592_2
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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443..652
DNA (210bp) protein (70aa)
Putative ribosomal L37ae protein family protein Tax=Thaumarchaeota archaeon N4 RepID=V6AS73_9ARCH
Putative ribosomal L37ae protein family protein {ECO:0000313|EMBL:CDI05273.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_29592_3
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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636..881
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB02_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS82262.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
PLM3-1_170_b1_sep16_scaffold_29592_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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907..1299
DNA (393bp) protein (131aa)
prefoldin, chaperonin cofactor; K04798 prefoldin beta subunit bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
prefoldin, beta subunit
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_29592_5

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1329..2012
DNA (684bp) protein (228aa)
Crossover junction endonuclease MUS81 protein {ECO:0000313|EMBL:KFM17067.1}; EC=3.1.22.- {ECO:0000313|EMBL:KFM17067.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-D11.;"
ERCC4 domain-containing protein; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ERCC4 domain-containing protein
PLM3-1_170_b1_sep16_scaffold_29592_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2024..2332)
DNA (309bp) protein (103aa)
nucleotide binding protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
nucleotide binding protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_29592_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2423..3166)
DNA (744bp) protein (248aa)
ATP-NAD/AcoX kinase; K00858 NAD+ kinase [EC:2.7.1.23] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ATP-NAD/AcoX kinase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_29592_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3257..4102
DNA (846bp) protein (282aa)
cysA; putative thiosulfate sulfurtransferase (EC:2.8.1.1)
rhodanese domain-containing protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_29592_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4104..4352
DNA (249bp) protein (83aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_29592_10
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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4474..5430
DNA (957bp) protein (319aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Thaumarchaeota archaeon N4 RepID=V6ARK3_9ARCH
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDI05282.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
4Fe-4S ferredoxin
PLM3-1_170_b1_sep16_scaffold_29592_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5490..6854
DNA (1365bp) protein (455aa)
glycosyl transferase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
glycosyl transferase
Tax=CSP1_1_Thaumarchaeota
Displaying 11 items

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