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PLM3-1_170_b1_sep16_scaffold_5940

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_5940_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3..563
DNA (561bp) protein (187aa)
isopentenyl-diphosphate delta-isomerase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
isopentenyl-diphosphate delta-isomerase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_5940_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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560..1531
DNA (972bp) protein (324aa)
polyprenyl synthetase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
polyprenyl synthetase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_5940_3

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1533..3041
DNA (1509bp) protein (503aa)
gltX; Glutamate--tRNA ligase (EC:6.1.1.17)
Uncharacterized protein {ECO:0000313|EMBL:KKM89958.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glutamyl-tRNA synthetase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PLM3-1_170_b1_sep16_scaffold_5940_4

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2989..3192
DNA (204bp) protein (68aa)
Glutamate--tRNA ligase {ECO:0000256|SAAS:SAAS00088701}; EC=6.1.1.17 {ECO:0000256|SAAS:SAAS00088701};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_199_D03.;"
gltX; Glutamate--tRNA ligase (EC:6.1.1.17)
Putative tRNA synthetases class I (E and Q), catalytic domain protein Tax=uncultured marine crenarchaeote HF4000_ANIW137N18 RepID=B3T503_9ARCH
PLM3-1_170_b1_sep16_scaffold_5940_5

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3199..3663
DNA (465bp) protein (155aa)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CU34_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM89959.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
5-carboxymethyl-2-hydroxymuconate delta-isomerase
PLM3-1_170_b1_sep16_scaffold_5940_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3688..3939
DNA (252bp) protein (84aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
5-carboxymethyl-2-hydroxymuconate delta-isomerase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_5940_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3936..4745)
DNA (810bp) protein (270aa)
N-acetyltransferase GCN5 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
acetyltransferase (GNAT) domain protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_5940_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4788..5096
DNA (309bp) protein (103aa)
Rieske (2Fe-2S) domain-containing protein; K05710 dioxygenase ferredoxin subunit bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Rieske (2Fe-2S) domain-containing protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_5940_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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5119..5394
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6ARL5_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05165.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_5940_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5478..6182
DNA (705bp) protein (235aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_5940_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6219..6566
DNA (348bp) protein (116aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_5940_trna_1
unknown

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comp(6853..6924)
DNA (72bp)
transferRNA His
PLM3-1_170_b1_sep16_scaffold_5940_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7201..8229
DNA (1029bp) protein (343aa)
Mg2 transporter protein CorA family protein; K03284 magnesium transporter bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Mg2 transporter protein CorA family protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_5940_13
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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8286..9311
DNA (1026bp) protein (342aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1 {ECO:0000256|HAMAP-Rule:MF_01921}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
Wyosine base formation domain protein Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CY40_9ARCH
tRNA-modifying protein
PLM3-1_170_b1_sep16_scaffold_5940_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9729..10349)
DNA (621bp) protein (207aa)
Kae1-associated kinase Bud32 (EC:2.7.-.-)
Mn2+-dependent serine/threonine protein kinase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
Displaying 15 items

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