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PLM3-1_170_b1_sep16_scaffold_7398

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_7398_1
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3..1706
DNA (1704bp) protein (568aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
isoleucyl-tRNA synthetase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7398_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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1831..2160
DNA (330bp) protein (110aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7398_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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2915..3265
DNA (351bp) protein (117aa)
sucC; succinyl-CoA ligase (ADP-forming) beta subunit (EC:6.2.1.5)
succinate--CoA ligase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7398_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3262..4164
DNA (903bp) protein (301aa)
CoA-binding domain-containing protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
CoA-binding domain-containing protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7398_5

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4206..4373
DNA (168bp) protein (56aa)
Ribosomal protein L40e (RP-L40e, RPL40) {ECO:0000313|EMBL:AIF04501.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_175_B03.;"
ribosomal protein L40e; K02927 large subunit ribosomal protein L40e bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=bin2_Thaum organism_group=Archaeon
ribosomal protein L40e
PLM3-1_170_b1_sep16_scaffold_7398_trna_1
unknown

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4412..4509
DNA (98bp)
transferRNA Val
PLM3-1_170_b1_sep16_scaffold_7398_6
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(4541..4807)
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AT89_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05735.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
PLM3-1_170_b1_sep16_scaffold_7398_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5109..6680
DNA (1572bp) protein (524aa)
pepF/M3 family oligoendopeptidase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
pepF/M3 family oligoendopeptidase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7398_8
Marine Group I thaumarchaeote SCGC RSA3, Thaumarchaeota, Archaea

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6683..6880
DNA (198bp) protein (66aa)
Oligopeptidase A protein {ECO:0000313|EMBL:KFM17899.1}; EC=3.4.24.70 {ECO:0000313|EMBL:KFM17899.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC RSA3.;"
Oligoendopeptidase, pepF/M3 family Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5R8_NITMS
pepF/M3 family oligoendopeptidase
PLM3-1_170_b1_sep16_scaffold_7398_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7067..8083
DNA (1017bp) protein (339aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
conserved exported protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7398_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8208..9239)
DNA (1032bp) protein (344aa)
arginine decarboxylase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
arginine decarboxylase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7398_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9303..9881
DNA (579bp) protein (193aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7398_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9858..10067)
DNA (210bp) protein (70aa)
Putative uncharacterized protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_7398_trna_2
unknown

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10152..10226
DNA (75bp)
transferRNA Thr
Displaying 14 items

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