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PLM3-1_170_b1_sep16_scaffold_2546

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2546_1
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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3..206
DNA (204bp) protein (68aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
CobB/CobQ-like glutamine amidotransferase domain protein (Fragment) Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E4X4_9ARCH
cobyrinic acid a,c-diamide synthase
PLM3-1_170_b1_sep16_scaffold_2546_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(195..833)
DNA (639bp) protein (213aa)
cobH; precorrin-8X methylmutase (EC:5.4.99.61)
precorrin-8X methylmutase CbiC/CobH bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_2546_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(823..1575)
DNA (753bp) protein (251aa)
cobalamin (vitamin B12) biosynthesis CbiX protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cobalamin (vitamin B12) biosynthesis CbiX protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_2546_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1572..2630)
DNA (1059bp) protein (353aa)
cobalamin (vitamin B12) biosynthesis protein CbiG bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Cobalamin (Vitamin B12) biosynthesis protein CbiG
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_2546_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2671..3759)
DNA (1089bp) protein (363aa)
cobalamin biosynthesis protein CbiD bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cobalamin biosynthesis protein CbiD
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_2546_6

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comp(3798..4247)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AVD2_9ARCH
DnaJ homolog, subfamily B, member 3 homolog (Predicted)-like protein {ECO:0000313|EMBL:AIF20172.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_88_E12.;"
DnaJ domain protein
PLM3-1_170_b1_sep16_scaffold_2546_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4287..5171
DNA (885bp) protein (295aa)
NAD-dependent epimerase/dehydratase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NAD-dependent epimerase/dehydratase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_2546_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5148..6314)
DNA (1167bp) protein (389aa)
methionine adenosyltransferase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
methionine adenosyltransferase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_2546_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(6334..6492)
DNA (159bp) protein (53aa)
Putative snRNP Sm-like protein (Modular protein) Tax=Thaumarchaeota archaeon N4 RepID=V6AVE9_9ARCH
Putative snRNP Sm-like protein (Modular protein) {ECO:0000313|EMBL:CDI06529.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
putative snRNP Sm-like protein
PLM3-1_170_b1_sep16_scaffold_2546_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6680..7336
DNA (657bp) protein (219aa)
recombinase A bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Rad51
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_2546_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7371..7490
DNA (120bp) protein (40aa)
Uncharacterized protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_2546_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7447..9435
DNA (1989bp) protein (663aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DEAD/DEAH box helicase domain protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_2546_13

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9681..10142
DNA (462bp) protein (154aa)
hypothetical protein Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI00037C133B
DEAD/DEAH box helicase domain-containing protein (Lhr) {ECO:0000313|EMBL:AIF23327.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote SAT1000_15_B11.;"
DEAD/DEAH box helicase
PLM3-1_170_b1_sep16_scaffold_2546_14
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(10139..11536)
DNA (1398bp) protein (466aa)
Nucleic acid binding OB-fold tRNA/helicase-type Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KN45_9ARCH
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:EGG41278.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
Nucleic acid-binding domain protein
PLM3-1_170_b1_sep16_scaffold_2546_15
unknown

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comp(11675..11824)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 15 items

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