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PLM3-1_170_b1_sep16_scaffold_5850_10

Organism: PLM6_170_b1_sep16_Thaumarchaeota_37_7

near complete RP 29 / 55 MC: 3 BSCG 14 / 51 ASCG 31 / 38 MC: 1
Location: comp(6394..6624)

Top 3 Functional Annotations

Value Algorithm Source
Small nuclear ribonucleoprotein (RUXX) {ECO:0000313|EMBL:AIF10811.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_47_A04.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 76.0
  • Bit_score: 146
  • Evalue 1.50e-32
like-Sm ribonucleoprotein core bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 76.0
  • Bit_score: 143
  • Evalue 5.40e-32
putative snRNP Sm-like protein similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 76.0
  • Bit_score: 140
  • Evalue 1.70e-31

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Taxonomy

uncultured marine thaumarchaeote KM3_47_A04 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 231
ATGTCAGTCGACATGGCAGTAAAAGTATTGGATGAGAGCATCAACAAAGTTGTCTTGATCAAACTTAAAGGTAATAAGACAATTAGAGGAAACTTGTTGGGCTTTGATCAACACATGAATCTGCTACTCGACCAGTCAGAAGAGATCCCTTCTGAGGGTGAATCAAAGAGTCTTGGAACCATAGTTGTGCGTGGAGATAATGTAGTTATGATATCACCACCTCCTGGATAA
PROTEIN sequence
Length: 77
MSVDMAVKVLDESINKVVLIKLKGNKTIRGNLLGFDQHMNLLLDQSEEIPSEGESKSLGTIVVRGDNVVMISPPPG*