ggKbase home page

PLM3-1_170_b1_sep16_scaffold_4814

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_4814_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
transketolase (EC:2.2.1.1)
Transketolase-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZZ8_RUBXD
Transketolase-like protein {ECO:0000313|EMBL:ABG03030.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3-1_170_b1_sep16_scaffold_4814_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1075..1449
DNA (375bp) protein (125aa)
transaldolase (EC:2.2.1.2)
transaldolase Tax=Saccharopolyspora spinosa RepID=UPI000237B475
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_170_b1_sep16_scaffold_4814_3
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1446..2174)
DNA (729bp) protein (243aa)
Myo-inositol-1(Or 4)-monophosphatase Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2Z9H2_9PSEU
histidinol phosphatase
Histidinol phosphatase {ECO:0000313|EMBL:AJK52265.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
PLM3-1_170_b1_sep16_scaffold_4814_4
unknown

Not on your lists

comp(2298..4031)
DNA (1734bp) protein (578aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_4814_5
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(4239..5393)
DNA (1155bp) protein (385aa)
amidase (EC:3.5.1.4)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A {ECO:0000313|EMBL:ABQ91446.1}; EC=6.3.5.- {ECO:0000313|EMBL:ABQ91446.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXU3_ROSS1
PLM3-1_170_b1_sep16_scaffold_4814_6
unknown

Not on your lists

comp(5591..5713)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_4814_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5710..6951)
DNA (1242bp) protein (414aa)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
protoheme IX farnesyltransferase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b1_sep16_scaffold_4814_8
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6923..7588)
DNA (666bp) protein (222aa)
Cytochrome c oxidase subunit I type {ECO:0000313|EMBL:ABX02757.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABX02757.1};; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
Cytochrome c oxidase subunit I type Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5D2_HERA2
cytochrome c oxidase subunit I type
Displaying 8 items

View Taxonomy