ggKbase home page

PLM3-1_170_b1_sep16_scaffold_19896

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_19896_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3..362
DNA (360bp) protein (120aa)
hypothetical protein Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI0003743E6D
LmbE family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_170_b1_sep16_scaffold_19896_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

409..780
DNA (372bp) protein (124aa)
YbaK/prolyl-tRNA synthetase associated domain-containing protein bin=bin3_NC10 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin3_NC10 organism_group=NC10
YbaK/prolyl-tRNA synthetase associated domain-containing protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_170_b1_sep16_scaffold_19896_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(872..2314)
DNA (1443bp) protein (481aa)
Polysaccharide biosynthesis protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F446_CONWI
polysaccharide biosynthesis protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_170_b1_sep16_scaffold_19896_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2315..3310)
DNA (996bp) protein (332aa)
Uncharacterized protein Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LS40_9CLOT bin=16ft_combo_ws3_JS1 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b1_sep16_scaffold_19896_5
Pseudoalteromonas luteoviolacea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3252..3740)
DNA (489bp) protein (163aa)
Uncharacterized protein Tax=Oscillibacter sp. 1-3 RepID=R9M751_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKE83968.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas luteoviolacea S4054.;"
PLM3-1_170_b1_sep16_scaffold_19896_6
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3765..4388)
DNA (624bp) protein (208aa)
Methyltransferase type 11 Tax=Amycolatopsis mediterranei RepID=D8HRE0_AMYMU
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:AEK46624.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3-1_170_b1_sep16_scaffold_19896_7
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4385..5596)
DNA (1212bp) protein (404aa)
ATP-dependent carboxylate-amine ligase domain protein ATP-grasp Tax=Methylomonas methanica (strain MC09) RepID=F9ZZF1_METMM
ATP-dependent carboxylate-amine ligase domain-containing protein
ATP-dependent carboxylate-amine ligase domain protein ATP-grasp {ECO:0000313|EMBL:AEG02344.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas methanica (strain MC09).;"
Displaying 7 items

View Taxonomy