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PLM3-1_170_b1_sep16_scaffold_6259

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_6259_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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3..1361
DNA (1359bp) protein (453aa)
Adenylosuccinate lyase Tax=uncultured Acidobacteria bacterium RepID=H5SIT3_9BACT
adenylosuccinate lyase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_170_b1_sep16_scaffold_6259_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1354..2211
DNA (858bp) protein (286aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase bin=GWC2_Chloroflexi_73_18 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_170_b1_sep16_scaffold_6259_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2208..2450
DNA (243bp) protein (81aa)
hypothetical protein Tax=Amorphus coralli RepID=UPI0003627497
phosphoribosylformylglycinamidine synthetase PurS
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_170_b1_sep16_scaffold_6259_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2447..3142
DNA (696bp) protein (232aa)
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000255|HAMAP-Rule:MF_00421}; Short=FGAM synthase {ECO:0000255|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000255|HAMAP-Rule:MF_00421};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000255|HAMAP-Rule:MF_00421}; Short=FGAR amidotransferase I {ECO:0000255|HAMAP-Rule:MF_00421};; Short=FGAR-AT I {ECO:0000255|HAMAP-Rule:MF_00421};; Glutaminase PurQ {ECO:0000255|HAMAP-Rule:MF_00421}; EC=3.5.1.2 {ECO:0000255|HAMAP-Rule:MF_00421};; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000255|HAMAP-Rule:MF_00421}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Phosphoribosylformylglycinamidine synthase 1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=PURQ_RUBXD
PLM3-1_170_b1_sep16_scaffold_6259_5
unknown

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comp(3182..3460)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_6259_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3539..5086
DNA (1548bp) protein (516aa)
choline dehydrogenase (EC:1.1.99.1)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003800821
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_170_b1_sep16_scaffold_6259_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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5111..5551
DNA (441bp) protein (147aa)
hypothetical protein bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b1_sep16_scaffold_6259_8

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5515..5922
DNA (408bp) protein (136aa)
Major facilitator superfamily MFS-1 (Fragment) Tax=mine drainage metagenome RepID=T0ZEF8_9ZZZZ
Major facilitator superfamily MFS-1 {ECO:0000313|EMBL:EQD46551.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
major facilitator transporter
Displaying 8 items

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