ggKbase home page

PLM3-1_170_b1_sep16_scaffold_6490

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_6490_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

235..1113
DNA (879bp) protein (293aa)
Formate/nitrite transporter bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
formate/nitrite transporter
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_170_b1_sep16_scaffold_6490_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1261..1674)
DNA (414bp) protein (138aa)
UspA domain protein Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MY07_PYRCJ
universal stress protein UspG
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_170_b1_sep16_scaffold_6490_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1860..2957)
DNA (1098bp) protein (366aa)
RNA polymerase sigma factor SigA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFH8_CONWI
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_170_b1_sep16_scaffold_6490_4
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3148..4020)
DNA (873bp) protein (291aa)
L-asparaginase II Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SM59_THEM7
L-asparaginase II
L-asparaginase II {ECO:0000313|EMBL:ADU50389.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
PLM3-1_170_b1_sep16_scaffold_6490_5
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4059..5339
DNA (1281bp) protein (427aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036DA674
Export protein {ECO:0000313|EMBL:EWM16983.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_6490_6
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5332..5811
DNA (480bp) protein (160aa)
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
DNA-formamidopyrimidine glycosylase {ECO:0000313|EMBL:ACG75243.1}; EC=3.2.2.23 {ECO:0000313|EMBL:ACG75243.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
DNA-formamidopyrimidine glycosylase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UGG1_ANASK
Displaying 6 items

View Taxonomy