ggKbase home page

PLM3-1_170_b1_sep16_scaffold_5936

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_5936_1

Not on your lists

2..583
DNA (582bp) protein (194aa)
IMP cyclohydrolase (EC:3.5.4.10 2.1.2.3)
Bifunctional purine biosynthesis protein PurH Tax=Thermotoga thermarum DSM 5069 RepID=F7YWW3_9THEM
Marine sediment metagenome DNA, contig: S01H1_S23541 {ECO:0000313|EMBL:GAG21214.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_5936_2

Not on your lists

797..919
DNA (123bp) protein (41aa)
Marine sediment metagenome DNA, contig: S01H1_S11731 {ECO:0000313|EMBL:GAG01436.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_5936_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

930..1709
DNA (780bp) protein (260aa)
Cytochrome bc1 complex, cytochrome b6 subunit Tax=Nitrolancetus hollandicus Lb RepID=I4EJ34_9CHLR
cytochrome b/b6 domain
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_5936_4
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

1725..2720
DNA (996bp) protein (332aa)
Putative menaquinol-cytochrome C reductase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JM1_SYMTH
menaquinol-cytochrome C reductase
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_5936_5
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

2737..3420
DNA (684bp) protein (228aa)
Rieske (2Fe-2S) iron-sulfur domain protein Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WSS0_KYRT2
Rieske (2Fe-2S) domain-containing protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_5936_6
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

3481..4605
DNA (1125bp) protein (375aa)
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_5936_7

Not on your lists

4670..5182
DNA (513bp) protein (171aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL74485.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cellulose-binding domain-containing protein bin=RBG_16_Aminicenantes_66_30 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PLM3-1_170_b1_sep16_scaffold_5936_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

5311..5436
DNA (126bp) protein (42aa)
Desulfoferrodoxin Dfx 6..36 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_5936_9
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

5449..5592
DNA (144bp) protein (48aa)
Desulfoferrodoxin Dfx 8..36 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_5936_10

Not on your lists

5741..5935
DNA (195bp) protein (65aa)
30S ribosomal protein S21 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CB07_THET1
Marine sediment metagenome DNA, contig: S01H1_L07514 {ECO:0000313|EMBL:GAF73227.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S21
PLM3-1_170_b1_sep16_scaffold_5936_11

Not on your lists

5983..6093
DNA (111bp) protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL26355.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 11 items

View Taxonomy