ggKbase home page

PLM3-1_170_b1_sep16_scaffold_7219

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_7219_1
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..803)
DNA (801bp) protein (267aa)
Transcription-repair-coupling factor Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GAX7_CHLAD
transcription-repair coupling factor
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_7219_2
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(889..1335)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R4C1_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV62722.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
PLM3-1_170_b1_sep16_scaffold_7219_3
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(1999..2592)
DNA (594bp) protein (198aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLS7_DESK7
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_7219_4

Not on your lists

comp(2695..3888)
DNA (1194bp) protein (398aa)
Cysteine desulfurase NifS Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPJ8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKL95631.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
class V aminotransferase
PLM3-1_170_b1_sep16_scaffold_7219_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

4233..4652
DNA (420bp) protein (140aa)
putative nucleotidyltransferase bin=GWC2_Chloroflexi_73_18 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b1_sep16_scaffold_7219_6
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4669..5166)
DNA (498bp) protein (166aa)
TetR family transcriptional regulator Tax=Amycolatopsis mediterranei RepID=D8I818_AMYMU
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AEK45999.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3-1_170_b1_sep16_scaffold_7219_7
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5334..6155
DNA (822bp) protein (274aa)
Short-chain dehydrogenase/reductase SDR Tax=Frankia sp. CN3 RepID=G6H4K7_9ACTO
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEH09033.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3-1_170_b1_sep16_scaffold_7219_8
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6183..7007)
DNA (825bp) protein (275aa)
hypothetical protein Tax=Streptomyces sulphureus RepID=UPI00037A1070
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
Displaying 8 items

View Taxonomy