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PLM3-1_170_b1_sep16_scaffold_3093

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3093_1
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..622
DNA (621bp) protein (207aa)
Methyltransferase type 11 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UDJ2_CELFN
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADG76448.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
PLM3-1_170_b1_sep16_scaffold_3093_2
Beggiatoa sp. SS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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927..1238
DNA (312bp) protein (104aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. SS.;"
Ribonuclease VapC Tax=Beggiatoa sp. SS RepID=A7BKI1_9GAMM
PilT protein domain-containing protein
PLM3-1_170_b1_sep16_scaffold_3093_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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1258..2634
DNA (1377bp) protein (459aa)
dly:Dehly_0351 ATPase central domain-containing protein; K07478 putative ATPase bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
recombination factor protein RarA
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_3093_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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3206..3748
DNA (543bp) protein (181aa)
Chloramphenicol phosphotransferase family protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4U3_9CHLR
Chloramphenicol phosphotransferase family protein {ECO:0000313|EMBL:EFH81523.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_3093_5
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(3738..4088)
DNA (351bp) protein (117aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Nitrolancetus hollandicus Lb RepID=I4EKP5_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_3093_6
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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4488..6155
DNA (1668bp) protein (556aa)
hypothetical protein bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3-1_170_b1_sep16_scaffold_3093_7
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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6182..6499
DNA (318bp) protein (106aa)
Cupin domain protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZL9_THERP
cupin
Cupin domain protein {ECO:0000313|EMBL:ACM04574.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3-1_170_b1_sep16_scaffold_3093_8
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

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6596..7312
DNA (717bp) protein (239aa)
Two component transcriptional regulator, winged helix family Tax=Frankia sp. CN3 RepID=G6H3H7_9ACTO
winged helix family two component transcriptional regulator
Tax=BJP_IG2069_Chloroflexi_70_12
PLM3-1_170_b1_sep16_scaffold_3093_9
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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7332..8543
DNA (1212bp) protein (404aa)
Integral membrane sensor signal transduction histidine kinase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1A8_HERA2
integral membrane sensor signal transduction histidine kinase
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM3-1_170_b1_sep16_scaffold_3093_10

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comp(8521..9249)
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEG3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKK53121.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_3093_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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9479..10249
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XCP0_NAKMY
Secreted protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3-1_170_b1_sep16_scaffold_3093_12
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10762..11682
DNA (921bp) protein (307aa)
Haloalkane dehalogenase {ECO:0000313|EMBL:KFX71108.1}; EC=3.8.1.5 {ECO:0000313|EMBL:KFX71108.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
Alpha/beta hydrolase fold protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYE6_9CHLR
haloalkane dehalogenase
PLM3-1_170_b1_sep16_scaffold_3093_13
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11679..12092
DNA (414bp) protein (138aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB43964.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
hypothetical protein bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudomonas stutzeri genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
PLM3-1_170_b1_sep16_scaffold_3093_14
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12089..12970
DNA (882bp) protein (294aa)
metal-dependent hydrolase (EC:3.-.-.-)
Metallo-beta-lactamase family protein Tax=Erythrobacter sp. NAP1 RepID=A3WA08_9SPHN
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EAQ29661.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. NAP1.;"
PLM3-1_170_b1_sep16_scaffold_3093_15

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comp(12967..13227)
DNA (261bp) protein (87aa)
Metallo-beta-lactamase family protein Tax=Veillonella sp. 3_1_44 RepID=D6KIJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKM98500.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
beta-lactamase
Displaying 15 items

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