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PLM3-1_170_b1_sep16_scaffold_10260

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_10260_1
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(2..196)
DNA (195bp) protein (65aa)
FmdB family regulatory protein bin=RBG_16_Aminicenantes_66_30 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
FmdB family regulatory protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_10260_2

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comp(141..536)
DNA (396bp) protein (132aa)
Marine sediment metagenome DNA, contig: S01H1_L02508 {ECO:0000313|EMBL:GAF76507.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
endonuclease bin=bin11_novelCP species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=bin11_novelCP organism_group=Unknown_CP
PLM3-1_170_b1_sep16_scaffold_10260_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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1073..1714
DNA (642bp) protein (214aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037278A4
PA-phosphatase-like phosphoesterase
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_10260_4
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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1897..2922
DNA (1026bp) protein (342aa)
Radical SAM protein Tax=Acidocella sp. MX-AZ02 RepID=K5XSJ6_9PROT
Radical SAM superfamily protein
Tax=RBG_16_Zixibacteria_48_11_curated
PLM3-1_170_b1_sep16_scaffold_10260_5
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(2919..3329)
DNA (411bp) protein (137aa)
UPF0102 protein OSCT_0607 Tax=Oscillochloris trichoides DG-6 RepID=E1IBA6_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_10260_6
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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comp(3345..3770)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Mycobacterium colombiense CECT 3035 RepID=J4TLY5_9MYCO
putative metal-dependent hydrolase with the TIM-barrel fold
Tax=RBG_16_Acidobacteria_64_8_curated
PLM3-1_170_b1_sep16_scaffold_10260_7

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comp(3710..4321)
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=Mycobacterium avium complex (MAC) RepID=H8J7V1_MYCIT
Uncharacterized protein {ECO:0000313|EMBL:KKM66264.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phospho triesterase-like protein
PLM3-1_170_b1_sep16_scaffold_10260_8
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(4352..5002)
DNA (651bp) protein (217aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYZ1_ANATU
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_10260_9

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5149..5337
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM66262.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
4-oxalocrotonate tautomerase bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-oxalocrotonate tautomerase
PLM3-1_170_b1_sep16_scaffold_10260_10
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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6137..7393
DNA (1257bp) protein (419aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH Tax=Nitrolancetus hollandicus Lb RepID=I4ECQ2_9CHLR
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_10260_11
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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7636..8100
DNA (465bp) protein (155aa)
50S ribosomal protein L21 (EC:2.3.1.61); K02888 large subunit ribosomal protein L21 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
rplU; 50S ribosomal protein L21
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_10260_12
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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8103..8363
DNA (261bp) protein (87aa)
50S ribosomal protein L27 Tax=Candidatus Regiella insecticola RepID=E0WR11_9ENTR
rpmA; ribosomal protein L27
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_10260_13
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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8369..8572
DNA (204bp) protein (68aa)
50S ribosomal protein L31 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEQ5_THET1
50S ribosomal protein L31
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_10260_14
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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8637..9578
DNA (942bp) protein (314aa)
dly:Dehly_0204 hypothetical protein bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM3-1_170_b1_sep16_scaffold_10260_15
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(9751..10068)
DNA (318bp) protein (106aa)
hypothetical protein Tax=Alkalibacillus haloalkaliphilus RepID=UPI0002FF5A05
phosphoribosyl-ATP diphosphatase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_10260_16

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comp(10093..10521)
DNA (429bp) protein (143aa)
Imidazole glycerol phosphate synthase subunit HisF Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RB53_AMMDK
Uncharacterized protein {ECO:0000313|EMBL:KKM26119.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
imidazole glycerol phosphate synthase subunit HisF
Displaying 16 items

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