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PLM3-1_170_b1_sep16_scaffold_2912

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2912_1
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..265)
DNA (264bp) protein (88aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
histidine kinase Tax=Nevskia ramosa RepID=UPI0003B5F43E
GAF sensor signal transduction histidine kinase
PLM3-1_170_b1_sep16_scaffold_2912_2
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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814..1296
DNA (483bp) protein (161aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035D4875
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_170_b1_sep16_scaffold_2912_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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1434..2426
DNA (993bp) protein (331aa)
Periplasmic component of the tol biopolymer transport system Tax=uncultured Chloroflexi bacterium HF0500_03M05 RepID=E0XY65_9CHLR
WD40-like beta Propeller containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_2912_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3026..3694)
DNA (669bp) protein (223aa)
Acyl-CoA dehydrogenase Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML56_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA45464.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
acyl-CoA dehydrogenase
PLM3-1_170_b1_sep16_scaffold_2912_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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3749..5695
DNA (1947bp) protein (649aa)
response regulator receiver protein bin=bin9_gal15 species=Ornithinimicrobium pekingense genus=Ornithinimicrobium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
response regulator receiver protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_170_b1_sep16_scaffold_2912_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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6298..6996
DNA (699bp) protein (233aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6HF82_9ACTO
integrase catalytic region
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3-1_170_b1_sep16_scaffold_2912_7
unknown

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7271..7771
DNA (501bp) protein (167aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2912_8
CSP1_5_NC10, NC10, Bacteria

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comp(8784..10751)
DNA (1968bp) protein (656aa)
Putative PA domain-containing protein (Precursor) bin=bin3_NC10 species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_2912_9
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11197..11775)
DNA (579bp) protein (193aa)
hypothetical protein Tax=Maricaulis sp. JL2009 RepID=UPI0003A711FC
Uncharacterized protein {ECO:0000313|EMBL:KIH98140.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_2912_10
unknown

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11897..12832
DNA (936bp) protein (312aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2912_11
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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13016..13390
DNA (375bp) protein (125aa)
Integrase, catalytic region Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RN45_BLASD
integrase, catalytic region
Integrase, catalytic region {ECO:0000313|EMBL:CCG01398.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM3-1_170_b1_sep16_scaffold_2912_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(13833..14534)
DNA (702bp) protein (234aa)
Putative transposase Tax=Frankia sp. CN3 RepID=G6HDG6_9ACTO
integrase catalytic subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 12 items

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