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PLM3-1_170_b1_sep16_scaffold_383

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_383_1
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8..907)
DNA (900bp) protein (300aa)
YceI family protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y2P4_THEBD
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ADG86855.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM3-1_170_b1_sep16_scaffold_383_2
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1042..1308)
DNA (267bp) protein (89aa)
Putative transposase Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5USK5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGM17827.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
phage integrase
PLM3-1_170_b1_sep16_scaffold_383_3
unknown

Not on your lists

1380..1880
DNA (501bp) protein (167aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_383_4
Vibrio tubiashii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1829..2278)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Vibrio tubiashii RepID=F9T4E3_9VIBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW13331.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio tubiashii ATCC 19109.;"
PLM3-1_170_b1_sep16_scaffold_383_5
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2275..2532)
DNA (258bp) protein (86aa)
DNA glycosylase Tax=Streptomyces sp. CNS615 RepID=UPI000379536E
DNA mismatch endonuclease {ECO:0000313|EMBL:GAD81851.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
putative DNA mismatch endonuclease
PLM3-1_170_b1_sep16_scaffold_383_6
unknown

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2574..2837
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_383_7
unknown

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2864..3982
DNA (1119bp) protein (373aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_383_8
unknown

Not on your lists

comp(3963..4085)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_383_9
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4082..4861)
DNA (780bp) protein (260aa)
transposase IS401 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00037DCCAC
integrase
Integrase {ECO:0000313|EMBL:AIJ23031.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM3-1_170_b1_sep16_scaffold_383_10
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4833..5255)
DNA (423bp) protein (141aa)
Transposase IS3/IS911 family protein Tax=Mycobacterium RepID=A1UD34_MYCSK
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ABL90742.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain KMS).;"
PLM3-1_170_b1_sep16_scaffold_383_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5437..5748)
DNA (312bp) protein (104aa)
Ser/Thr protein phosphatase family protein Tax=Sulfobacillus acidophilus RepID=F8I324_SULAT
Ser/Thr protein phosphatase family protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03595.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL).;"
PLM3-1_170_b1_sep16_scaffold_383_12
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6003..6491)
DNA (489bp) protein (163aa)
Transcriptional regulator, AsnC family Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B1S8_HERA2
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABX05370.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3-1_170_b1_sep16_scaffold_383_13
unknown

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6629..6835
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_383_14
unknown

Not on your lists

6835..7080
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_383_15
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7218..8288
DNA (1071bp) protein (357aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036AA007
Uncharacterized protein {ECO:0000313|EMBL:KGM17655.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
PLM3-1_170_b1_sep16_scaffold_383_16
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8276..9145
DNA (870bp) protein (290aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM17654.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
putative ABC transporter permease protein bin=bin8_Chloro species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
putative ABC transporter permease protein
PLM3-1_170_b1_sep16_scaffold_383_17
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9170..9973
DNA (804bp) protein (268aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM17653.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
ABC transporter related protein bin=GWC2_Chloroflexi_73_18 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
nitrate/sulfonate/bicarbonate ABC transporter ATPase
PLM3-1_170_b1_sep16_scaffold_383_18
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9970..10815
DNA (846bp) protein (282aa)
Binding-protein-dependent transport systems inner membrane component Tax=Frankia sp. EUN1f RepID=D3CSY6_9ACTO
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFC86216.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
tauC; sulfonate/nitrate/taurine transport system permease
PLM3-1_170_b1_sep16_scaffold_383_19
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10932..12008
DNA (1077bp) protein (359aa)
Putative NMT1/THI5-like protein bin=GWC2_Chloroflexi_73_18 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative NMT1/THI5-like protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3-1_170_b1_sep16_scaffold_383_20
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12097..12933
DNA (837bp) protein (279aa)
Acyltransferase {ECO:0000313|EMBL:KGM17650.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
N-carbamoylputrescine amidase bin=GWC2_Chloroflexi_73_18 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
PLM3-1_170_b1_sep16_scaffold_383_21

Not on your lists

13076..14428
DNA (1353bp) protein (451aa)
4-aminobutyrate aminotransferase family protein Tax=uncultured prokaryote RepID=H5SL80_9ZZZZ
4-aminobutyrate aminotransferase family protein {ECO:0000313|EMBL:BAL56916.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
class III aminotransferase
PLM3-1_170_b1_sep16_scaffold_383_22
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14452..14856
DNA (405bp) protein (135aa)
pcaC; gamma-carboxymuconolactone decarboxylase (EC:4.1.1.44)
Gamma-carboxymuconolactone decarboxylase Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GHN7_METTF
Uncharacterized protein {ECO:0000313|EMBL:KGM17648.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
PLM3-1_170_b1_sep16_scaffold_383_23
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14981..16381
DNA (1401bp) protein (467aa)
Dihydropyrimidinase {ECO:0000313|EMBL:CEL14608.1}; EC=3.5.2.2 {ECO:0000313|EMBL:CEL14608.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
pydB; phenylhydantoinase (EC:3.5.2.2)
phenylhydantoinase Tax=Actinopolymorpha alba RepID=UPI000373455F
PLM3-1_170_b1_sep16_scaffold_383_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16594..17970
DNA (1377bp) protein (459aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIB4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43386.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_383_25
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18342..18953
DNA (612bp) protein (204aa)
Transposase Tax=Frankia sp. QA3 RepID=I9KFE7_9ACTO
Transposase {ECO:0000313|EMBL:EIV92790.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
transposase
PLM3-1_170_b1_sep16_scaffold_383_26
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18995..20413
DNA (1419bp) protein (473aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF84646.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
Lactaldehyde dehydrogenase bin=GWC2_Pelobacter_58_13 species=unknown genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
aldehyde dehydrogenase
PLM3-1_170_b1_sep16_scaffold_383_27
unknown

Not on your lists

comp(20410..20721)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_383_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20776..21297)
DNA (522bp) protein (174aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6HF75_9ACTO
integrase catalytic region
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_170_b1_sep16_scaffold_383_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21279..21833)
DNA (555bp) protein (185aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6HF82_9ACTO
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 29 items

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