ggKbase home page

PLM3-1_170_b1_sep16_scaffold_13771

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_13771_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2..229
DNA (228bp) protein (76aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Isoleucine--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8PC78_9BACT
PLM3-1_170_b1_sep16_scaffold_13771_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

229..732
DNA (504bp) protein (168aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase Tax=Candidatus Nitrospira defluvii RepID=D8PC79_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3-1_170_b1_sep16_scaffold_13771_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

733..1563
DNA (831bp) protein (277aa)
rluD2; 23S rRNA pseudouridine synthase (EC:4.2.1.70 5.4.99.-)
Pseudouridine synthase Tax=Candidatus Nitrospira defluvii RepID=D8PA98_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3-1_170_b1_sep16_scaffold_13771_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1571..4702
DNA (3132bp) protein (1044aa)
Putative phosphorylase, carbohydrate binding bin=GWF2_Methylomirabilis_70_14 species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative cyclic beta 1-2 glucan synthetase
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 4 items

View Taxonomy