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PLM3-1_170_b1_sep16_scaffold_42953

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_42953_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2..220
DNA (219bp) protein (73aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Queuosine biosynthesis protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0Z3_9CHLR
S-adenosylmethionine:tRNA ribosyltransferase-isomerase
PLM3-1_170_b1_sep16_scaffold_42953_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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253..669
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U420_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH81258.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
Deazaflavin-dependent nitroreductase
PLM3-1_170_b1_sep16_scaffold_42953_3
unknown

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754..963
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_42953_4
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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1122..1517
DNA (396bp) protein (132aa)
WD40 domain protein beta Propeller Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4L6_THERP
WD40 domain-containing protein beta Propeller
WD40 domain protein beta Propeller {ECO:0000313|EMBL:ACM06624.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM3-1_170_b1_sep16_scaffold_42953_5
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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1654..2571
DNA (918bp) protein (306aa)
Putative Beta-lactamase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z102_9ACTN
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_42953_6
unknown

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2679..2918
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_42953_7

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comp(2922..3260)
DNA (339bp) protein (113aa)
Marine sediment metagenome DNA, contig: S01H1_S21063 {ECO:0000313|EMBL:GAG23051.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Amidase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
PLM3-1_170_b1_sep16_scaffold_42953_8
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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comp(3260..4396)
DNA (1137bp) protein (379aa)
Amidase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
Tax=RBG_13_Chloroflexi_60_13_curated
PLM3-1_170_b1_sep16_scaffold_42953_9
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(4562..5146)
DNA (585bp) protein (195aa)
hypothetical protein Tax=WS1 bacterium JGI 0000059-K21 RepID=UPI000366D637
GCN5-related N-acetyltransferase
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3-1_170_b1_sep16_scaffold_42953_10

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comp(5492..6409)
DNA (918bp) protein (306aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL47694.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWA1_Treponema_62_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
xylose isomerase
PLM3-1_170_b1_sep16_scaffold_42953_11

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comp(6495..6860)
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL47695.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_42953_12
unknown

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7363..7461
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 12 items

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