ggKbase home page

PLM3-1_170_b1_sep16_scaffold_10460_11

Organism: PLM6_170_b1_sep16_Chloroflexi_64_6

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 9324..9821

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 160.0
  • Bit_score: 122
  • Evalue 7.90e-26
ECF subfamily RNA polymerase sigma-24 factor bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 164.0
  • Bit_score: 122
  • Evalue 2.80e-25
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 153.0
  • Bit_score: 134
  • Evalue 7.60e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 498
GTGCGCCGCTACCAGGATGCCGCATTCCGCGCCGCCTTCCTGGTGCTGCGCGACGCCGACGAGGCGCAAGATGCCGCCCAGGAGGGCTTCGTGAAGGCGTACAAGGCGCTCAACAGGTTCAAACGCGGCCACGAGTTCCGTCCATGGCTCCTCCGCATCGTCGTCAATCAGTCGCTGACGATGCTGCGCTCGCGTCGCCGCGGTTCCGCTGCCGCCGAACGGCTGGCGCTCTCGGAGCGGTCCATTTCGCACGGCATCGACGAAACCGTAATCGACCGCGAGCGCGCGCGGCTCGTGTGGGCAGCCCTCGACTCGCTGCGCGAGCAGGAGCGCGTCGTCGTCTACCTGCGCTACTTCCTCAACCTCCCCGAGCGCGAACTGGCCGCGTACCTCGGCTGTGCCCAGGGCACCGTCAAGTCACGGCTGCACCGCGCGCTGCGCAAGCTACGCGAGGTCGTGGCAACCCAATATCCGCAGTTGCTGGCGGAGATCAACTGA
PROTEIN sequence
Length: 166
VRRYQDAAFRAAFLVLRDADEAQDAAQEGFVKAYKALNRFKRGHEFRPWLLRIVVNQSLTMLRSRRRGSAAAERLALSERSISHGIDETVIDRERARLVWAALDSLREQERVVVYLRYFLNLPERELAAYLGCAQGTVKSRLHRALRKLREVVATQYPQLLAEIN*