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PLM3-1_170_b1_sep16_scaffold_10460

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_10460_1

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comp(1..843)
DNA (843bp) protein (281aa)
Peptide transporter permease subunit: membrane component of ABC superfamily Tax=Cupriavidus RepID=Q1LEI8_RALME
Uncharacterized protein {ECO:0000313|EMBL:KKK66311.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dppB; peptide ABC transporter permease
PLM3-1_170_b1_sep16_scaffold_10460_2

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comp(876..2690)
DNA (1815bp) protein (605aa)
ABC-type dipeptide transport system, periplasmic component Tax=Bacillales RepID=F2FAC6_SOLSS
Uncharacterized protein {ECO:0000313|EMBL:KKK58774.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dipeptide ABC transporter substrate-binding protein
PLM3-1_170_b1_sep16_scaffold_10460_3
unknown

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comp(2952..3293)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_10460_4

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comp(3421..4653)
DNA (1233bp) protein (411aa)
TyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI0002F41DF6
Marine sediment metagenome DNA, contig: S01H1_L06270 {ECO:0000313|EMBL:GAF73879.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_10460_5

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comp(4739..5656)
DNA (918bp) protein (306aa)
Riboflavin kinase / FMN adenylyltransferase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZQ7_ROSS1
Uncharacterized protein {ECO:0000313|EMBL:KKL78101.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
riboflavin biosynthesis protein RibF
PLM3-1_170_b1_sep16_scaffold_10460_6

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comp(5656..6600)
DNA (945bp) protein (315aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3N8_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KKL78100.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_10460_7
Pseudomonas sp. BAY1663, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6830..7207)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:EXF42815.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. BAY1663.;"
PLM3-1_170_b1_sep16_scaffold_10460_8

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7359..8087
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EM35_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKM18484.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATP-dependent RNA helicase
PLM3-1_170_b1_sep16_scaffold_10460_9
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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8113..8361
DNA (249bp) protein (83aa)
RNA binding protein Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11SF1_CYTH3
RNA binding protein
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3-1_170_b1_sep16_scaffold_10460_10

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comp(8433..9017)
DNA (585bp) protein (195aa)
Segregation and condensation protein A Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZ67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKL05264.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
chromosome segregation and condensation protein ScpA
PLM3-1_170_b1_sep16_scaffold_10460_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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9324..9821
DNA (498bp) protein (166aa)
ECF subfamily RNA polymerase sigma-24 factor
ECF subfamily RNA polymerase sigma-24 factor bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM3-1_170_b1_sep16_scaffold_10460_12
unknown

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9821..9952
DNA (132bp) protein (44aa)

This feature has no annotations

Displaying 12 items

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