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PLM3-1_170_b2_sep16_scaffold_1981

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1981_1
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2..1273)
DNA (1272bp) protein (424aa)
Binding-protein-dependent transport systems inner membrane component Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CW78_9ARCH
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EGP93530.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
binding-protein-dependent transport system inner membrane protein
PLM3-1_170_b2_sep16_scaffold_1981_2

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comp(1270..2283)
DNA (1014bp) protein (338aa)
Oligopeptide transport system permease protein AppB {ECO:0000313|EMBL:KFM16395.1}; EC=2.7.1.40 {ECO:0000313|EMBL:KFM16395.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-D11.;"
peptide ABC transporter permease Tax=Nitrosopumilus sp. SJ RepID=UPI0003611038
Binding-protein-dependent transporter inner membrane component
PLM3-1_170_b2_sep16_scaffold_1981_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2359..4824)
DNA (2466bp) protein (822aa)
ABC transporter substrate-binding protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
ABC transporter substrate-binding protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1981_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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5012..5644
DNA (633bp) protein (211aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1981_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(5630..7366)
DNA (1737bp) protein (579aa)
membrane protein; K08979 putative membrane protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
conserved membrane protein of unknown function
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1981_6

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comp(7571..7891)
DNA (321bp) protein (107aa)
hypothetical protein; K07143 UPF0148 protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
Sjogrens syndrome scleroderma autoantigen 1 protein {ECO:0000313|EMBL:KFM21033.1}; Flags: Fragment;; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-B03.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1981_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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7970..8278
DNA (309bp) protein (103aa)
translation initiation factor SUI1 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
translation initiation factor 1
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1981_8

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8284..8928
DNA (645bp) protein (215aa)
CAAX protease self-immunity protein {ECO:0000313|EMBL:KFM14928.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-O18.;"
abortive infection protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
CAAX protease self-immunity
PLM3-1_170_b2_sep16_scaffold_1981_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(9067..9699)
DNA (633bp) protein (211aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1981_10

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comp(9692..10612)
DNA (921bp) protein (307aa)
2-phospho-L-lactate transferase protein {ECO:0000313|EMBL:KFM18984.1}; EC=2.7.8.28 {ECO:0000313|EMBL:KFM18984.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-P11.;"
LPPG domain containing protein homolog to LPPG:FO 2-phospho-L-lactate transferase Tax=Thaumarchaeota archaeon N4 RepID=V6AS18_9ARCH
2-phospho-L-lactate transferase
PLM3-1_170_b2_sep16_scaffold_1981_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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10746..11804
DNA (1059bp) protein (353aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AS57_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05370.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
conserved exported protein of unknown function
PLM3-1_170_b2_sep16_scaffold_1981_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12156..14510)
DNA (2355bp) protein (785aa)
amino acid permease bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
universal stress family protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1981_13
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(14592..15086)
DNA (495bp) protein (165aa)
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AS54_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05365.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_1981_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(15095..18349)
DNA (3255bp) protein (1085aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1981_15
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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comp(18508..18705)
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Candidatus Nitrosoarchaeum RepID=S2ET97_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJA92885.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
PLM3-1_170_b2_sep16_scaffold_1981_16
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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19004..19303
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL20_NITGG
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
PLM3-1_170_b2_sep16_scaffold_1981_17
unknown

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comp(19522..19713)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1981_trna_1
unknown

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comp(19821..19894)
DNA (74bp)
transferRNA Pro
PLM3-1_170_b2_sep16_scaffold_1981_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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19976..20866
DNA (891bp) protein (297aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
map; methionine aminopeptidase, type II (EC:3.4.11.18)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1981_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(20856..21041)
DNA (186bp) protein (62aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b2_sep16_scaffold_1981_20
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(21038..22105)
DNA (1068bp) protein (356aa)
hypothetical protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
Tax=CSP1_1_Thaumarchaeota
Displaying 21 items

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