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PLM3-1_170_b2_sep16_scaffold_6589

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_6589_1
unknown

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1..195
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_6589_2

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comp(222..3038)
DNA (2817bp) protein (939aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_517.;"
Aconitate hydratase Tax=uncultured bacterium A1Q1_fos_517 RepID=L7VZH4_9BACT
aconitate hydratase 1
PLM3-1_170_b2_sep16_scaffold_6589_3
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3193..3810
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Halonotius sp. J07HN4 RepID=U1P8Q7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH06711.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_6589_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3821..5350)
DNA (1530bp) protein (510aa)
Peptidase M48 Ste24p Tax=Anaeromyxobacter RepID=B4UG09_ANASK bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase M48 Ste24p
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_6589_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5454..7490
DNA (2037bp) protein (679aa)
Transketolase Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q746U5_GEOSL
tkt; transketolase
Transketolase {ECO:0000313|EMBL:AAR36813.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM3-1_170_b2_sep16_scaffold_6589_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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7564..9120
DNA (1557bp) protein (519aa)
Putative membrane protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9GL09_SORC5 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_6589_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9267..9929
DNA (663bp) protein (221aa)
FG-GAP repeat protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XWF1_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_6589_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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9929..13153
DNA (3225bp) protein (1075aa)
FG-GAP repeat protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XWF1_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Cell surface protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_6589_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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13205..14686
DNA (1482bp) protein (494aa)
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBP8_AMMDK bin=16ft_combo_ws3_JS1 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 9 items

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