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PLM3-1_170_b2_sep16_scaffold_4031

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_4031_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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1..867
DNA (867bp) protein (289aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
malonyl CoA-ACP transacylase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_4031_2
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

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864..1610
DNA (747bp) protein (249aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Bacillus tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WP97_BACT2 bin=16ft_combo_ws3_JS1 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
3-ketoacyl-ACP reductase
Tax=RBG_13_Chloroflexi_54_9_curated
PLM3-1_170_b2_sep16_scaffold_4031_3
RLO_PLX_64_10, Bacteria

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1670..1915
DNA (246bp) protein (82aa)
Acyl carrier protein bin=GWF2_OP3_38_59 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
acyl carrier protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_4031_4
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

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1989..3248
DNA (1260bp) protein (420aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
3-oxoacyl-[acyl-carrier-protein] synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Desmospora sp. 8437 RepID=F5SCR3_9BACL
PLM3-1_170_b2_sep16_scaffold_4031_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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3279..4370
DNA (1092bp) protein (364aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 Tax=Caldithrix abyssi DSM 13497 RepID=H1XS94_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_4031_6
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4456..6123
DNA (1668bp) protein (556aa)
PEP-CTERM system TPR-repeat lipoprotein Tax=Thiorhodococcus drewsii AZ1 RepID=G2E621_9GAMM
PEP-CTERM system TPR-repeat lipoprotein {ECO:0000313|EMBL:EGV28506.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
Tfp pilus assembly protein PilF
PLM3-1_170_b2_sep16_scaffold_4031_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6169..6810
DNA (642bp) protein (214aa)
RNA polymerase sigma-70 factor, ECF subfamily Tax=uncultured Acidobacteria bacterium RepID=H5SBR5_9BACT bin=16ft_combo_ws3_JS1 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_4031_8
unknown

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comp(6833..7459)
DNA (627bp) protein (209aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_4031_9
RLO_PLX_64_10, Bacteria

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7480..8667
DNA (1188bp) protein (396aa)
putative S1B family peptidase (EC:3.4.21.-)
Putative S1B family peptidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U7_GEMAT
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_4031_10
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(8723..10474)
DNA (1752bp) protein (584aa)
PKD domain containing protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X7V6_ACISM
hypothetical protein
PKD domain containing protein {ECO:0000313|EMBL:ADW71540.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM3-1_170_b2_sep16_scaffold_4031_11
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11007..11870)
DNA (864bp) protein (288aa)
Transposase, IS4 family bin=GWD2_Deltaproteobacteria_55_8 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
transposase (IS4 family protein)
Tax=RBG_13_Deltaproteobacteria_53_10_curated
Displaying 11 items

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