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PLM3-1_170_b2_sep16_scaffold_4439

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_4439_1
R_RIF_OD1_10_47_33, RIF-OD1-1, Parcubacteria, Bacteria

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3..698
DNA (696bp) protein (232aa)
Putative uncharacterized protein bin=GWC2_Planctomycete_KSU_39_26 species=Marinobacter adhaerens genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_10_47_33_curated
PLM3-1_170_b2_sep16_scaffold_4439_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(986..3088)
DNA (2103bp) protein (701aa)
Putative uncharacterized protein Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47Z54_COLP3
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_4439_3
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3264..5051)
DNA (1788bp) protein (596aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3-1_170_b2_sep16_scaffold_4439_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(5174..5902)
DNA (729bp) protein (243aa)
Putative phosphohistidine phosphatase, SixA Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXI0_RUBXD
hypothetical protein
Putative phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ABG03898.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3-1_170_b2_sep16_scaffold_4439_5
unknown

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comp(6064..6210)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_4439_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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6361..8634
DNA (2274bp) protein (758aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Ig-like domain/kelch domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_4439_7
CG_Deferri_01, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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comp(8684..9400)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S6Y6_PEDSD bin=16ft_combo_ws3_JS1 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
photosynthetic reaction centre cytochrome c subunit
Tax=CG_Deferri_01
PLM3-1_170_b2_sep16_scaffold_4439_8
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(9450..9974)
DNA (525bp) protein (175aa)
id=3971145 bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3-1_170_b2_sep16_scaffold_4439_9
RLO_PLX_64_10, Bacteria

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comp(10018..10614)
DNA (597bp) protein (199aa)
putative protein-S-isoprenylcysteine methyltransferase bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
putative protein-S-isoprenylcysteine methyltransferase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_4439_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(10611..11840)
DNA (1230bp) protein (410aa)
Diaminopimelate decarboxylase bin=GWC2_Methylomirabilis_70_24 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lysA; diaminopimelate decarboxylase
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b2_sep16_scaffold_4439_11
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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comp(11857..13155)
DNA (1299bp) protein (433aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase Tax=Rhodothermus marinus RepID=D0MIN1_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM3-1_170_b2_sep16_scaffold_4439_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(13334..13951)
DNA (618bp) protein (206aa)
thrH; phosphoserine phosphatase; K02203 phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Propionibacterium sp. oral taxon 192 genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein (EC:2.7.1.39 3.1.3.3)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_4439_13
unknown

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comp(14212..14328)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 13 items

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