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PLM3-1_170_b2_sep16_scaffold_4594

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_4594_1
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(1..567)
DNA (567bp) protein (189aa)
TPR repeat-containing serine/threonin protein kinase bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine/threonine protein kinase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM3-1_170_b2_sep16_scaffold_4594_2
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(682..1338)
DNA (657bp) protein (219aa)
hypothetical protein Tax=Burkholderia sp. JPY251 RepID=UPI00036273E5
QbdB {ECO:0000313|EMBL:CDY77575.1}; Uncharacterized protein {ECO:0000313|EMBL:KDR44289.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_4594_3
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1462..2130
DNA (669bp) protein (223aa)
ABC transporter ATP-binding protein Tax=Streptomyces albus J1074 RepID=D6AYD3_9ACTO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EFE82936.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
PLM3-1_170_b2_sep16_scaffold_4594_4
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

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2834..4612
DNA (1779bp) protein (593aa)
Protease Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SD50_9DELT
S8A family peptidase
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
PLM3-1_170_b2_sep16_scaffold_4594_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(4650..5810)
DNA (1161bp) protein (387aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DWJ0_THIND
ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b2_sep16_scaffold_4594_6
unknown

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5955..6488
DNA (534bp) protein (178aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_4594_7
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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6488..7654
DNA (1167bp) protein (389aa)
2-hydroxy-acid oxidase Tax=Sorangium cellulosum So0157-2 RepID=S4Y9H4_SORCE
FMN-dependent alpha-hydroxy acid dehydrogenase
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3-1_170_b2_sep16_scaffold_4594_8
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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7685..8143
DNA (459bp) protein (153aa)
cyclase/dehydrase bin=bin9_gal15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
cyclase/dehydrase
Tax=CSP1_3_Armatimonadetes
PLM3-1_170_b2_sep16_scaffold_4594_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8140..9405
DNA (1266bp) protein (422aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Nitrolancetus hollandicus Lb RepID=I4EHK2_9CHLR
3-oxoacyl-[acyl-carrier-protein] synthase 2
PLM3-1_170_b2_sep16_scaffold_4594_10
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9427..9825
DNA (399bp) protein (133aa)
Putative uncharacterized protein bin=GWA2_OP3_52_12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
quinol oxidase
Tax=GWA2_Deltaproteobacteria_55_10_curated
PLM3-1_170_b2_sep16_scaffold_4594_11
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(9878..10966)
DNA (1089bp) protein (363aa)
Uncharacterized protein Tax=Asticcacaulis sp. AC402 RepID=V4NS84_9CAUL
tolB; translocation protein TolB
Tax=RBG_16_Actinobacteria_70_17_curated
PLM3-1_170_b2_sep16_scaffold_4594_12
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

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comp(11082..11714)
DNA (633bp) protein (211aa)
Phosphoglycerate mutase Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S1R0_DESTD
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ADY72915.1}; species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA).;"
PLM3-1_170_b2_sep16_scaffold_4594_13

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comp(11680..12297)
DNA (618bp) protein (206aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) {ECO:0000313|EMBL:CBI06721.1}; EC=1.2.1.11 {ECO:0000313|EMBL:CBI06721.1};; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
aspartate-semialdehyde dehydrogenase Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B370D2
PLM3-1_170_b2_sep16_scaffold_4594_14
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12294..12572)
DNA (279bp) protein (93aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|RuleBase:RU004501}; EC=1.2.1.11 {ECO:0000256|RuleBase:RU004501};; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
Aspartate-semialdehyde dehydrogenase Tax=Melioribacter roseus (strain P3M) RepID=I6YUY2_MELRP
aspartate-semialdehyde dehydrogenase
PLM3-1_170_b2_sep16_scaffold_4594_15
unknown

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12851..15022
DNA (2172bp) protein (724aa)

This feature has no annotations

Displaying 15 items

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