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PLM3-1_170_b2_sep16_scaffold_3637

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3637_1
unknown

Not on your lists

comp(1..339)
DNA (339bp) protein (113aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_3637_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(427..1146)
DNA (720bp) protein (240aa)
TonB family protein; K03832 periplasmic protein TonB bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
TonB family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_3637_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(1143..1661)
DNA (519bp) protein (173aa)
Biopolymer transport protein ExbD/TolR Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QWM0_CHLT3 bin=16ft_combo_ws3_JS1 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
biopolymer transport protein ExbD/TolR
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_3637_4
RLO_PLX_64_10, Bacteria

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comp(1698..2141)
DNA (444bp) protein (148aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_3637_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2143..2865)
DNA (723bp) protein (241aa)
MotA/TolQ/ExbB proton channel family protein; K03561 biopolymer transport protein ExbB bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
MotA/TolQ/ExbB proton channel family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_3637_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3006..3347)
DNA (342bp) protein (114aa)
Stage II sporulation protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIB5_CHLTF bin=16ft_combo_ws3_JS1 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
anti-sigma-factor antagonist
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_3637_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3384..5207)
DNA (1824bp) protein (608aa)
TPR repeat-containing protein Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K3M3_CYAP8 bin=16ft_combo_ws3_JS1 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
tetratricopeptide repeat protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_3637_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5204..6121)
DNA (918bp) protein (306aa)
Phosphate binding protein Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CK35_SYNLT bin=16ft_combo_ws3_JS1 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
pstS; phosphate-binding protein PstS
Tax=RBG_16_Planctomycetes_64_12_curated
PLM3-1_170_b2_sep16_scaffold_3637_9
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(6375..7862)
DNA (1488bp) protein (496aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LH04_9BACT
carboxypeptidase
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
Displaying 9 items

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