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PLM3-1_170_b2_sep16_scaffold_3913

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_3913_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1..438)
DNA (438bp) protein (146aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit beta (EC:1.2.4.4)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHN3_CHLTF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_3913_2
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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698..1219
DNA (522bp) protein (174aa)
Putative hydrolase of the alpha/beta superfamily Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIG6_CHLTF
putative alpha/beta superfamily hydrolase
Putative hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:AEP11864.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM3-1_170_b2_sep16_scaffold_3913_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1216..1944
DNA (729bp) protein (243aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66293.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
short chain dehydrogenase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
short-chain dehydrogenase/reductase SDR
PLM3-1_170_b2_sep16_scaffold_3913_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

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comp(1978..2877)
DNA (900bp) protein (300aa)
Predicted permease Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TVI2_METKA
permease
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
PLM3-1_170_b2_sep16_scaffold_3913_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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2974..5439
DNA (2466bp) protein (822aa)
Peptidase M1 membrane alanine aminopeptidase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LYM6_HALO1
peptidase M1 membrane alanine aminopeptidase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b2_sep16_scaffold_3913_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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5504..7468
DNA (1965bp) protein (655aa)
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit Tax=Aquifex aeolicus (strain VF5) RepID=LEUC_AQUAE bin=16ft_combo_ws3_JS1 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_3913_7
unknown

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comp(7496..7579)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 7 items

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