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PLM3-1_170_b2_sep16_scaffold_2161

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2161_1
unknown

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2161_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(333..2072)
DNA (1740bp) protein (580aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_170_b2_sep16_scaffold_2161_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2069..3235)
DNA (1167bp) protein (389aa)
petB; cytochrome bc complex cytochrome b subunit bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
petB; cytochrome bc complex cytochrome b subunit
Tax=CSP1_5_NC10
PLM3-1_170_b2_sep16_scaffold_2161_4
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3244..3735)
DNA (492bp) protein (164aa)
Plastoquinol--plastocyanin reductase (EC:1.10.9.1)
Putative Plastoquinol--plastocyanin reductase bin=GWF2_Ignavibacteria_35_20 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b2_sep16_scaffold_2161_5
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3812..5977)
DNA (2166bp) protein (722aa)
hypothetical protein bin=RBG_16_Aminicenantes_66_30 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b2_sep16_scaffold_2161_6
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(5990..6970)
DNA (981bp) protein (327aa)
Decaheme c-type cytochrome, DmsE family bin=GWA2_Elusimicrobia_66_18 species=Thiocystis violascens genus=Thiocystis taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
decaheme c-type cytochrome, DmsE family
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
PLM3-1_170_b2_sep16_scaffold_2161_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7314..8213
DNA (900bp) protein (300aa)
Putative uncharacterized protein Tax=Beggiatoa sp. PS RepID=A7BVL8_9GAMM bin=16ft_combo_ws3_JS1 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2161_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

8164..9510
DNA (1347bp) protein (449aa)
Putative uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PCH0_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2161_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

9581..10243
DNA (663bp) protein (221aa)
Putative uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PCH0_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2161_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

10240..10761
DNA (522bp) protein (174aa)
Putative uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PCH0_9BACT bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2161_11
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10765..13779)
DNA (3015bp) protein (1005aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
DNA polymerase III, alpha subunit Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGS3_SYNFM
DNA polymerase III subunit alpha
PLM3-1_170_b2_sep16_scaffold_2161_12
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13745..15070)
DNA (1326bp) protein (442aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000313|EMBL:ACT16597.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACT16597.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
DNA-directed DNA polymerase Tax=Geobacter sp. (strain M21) RepID=C6DZL5_GEOSM
PLM3-1_170_b2_sep16_scaffold_2161_13
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15113..15712)
DNA (600bp) protein (200aa)
LexA repressor Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=LEXA_SYNFM
SOS-response transcriptional repressor LexA
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM3-1_170_b2_sep16_scaffold_2161_14
unknown

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16012..16695
DNA (684bp) protein (228aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2161_15
unknown

Not on your lists

comp(16862..17029)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 15 items

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