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PLM3-1_170_b2_sep16_scaffold_2297

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2297_1
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..482
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Marinobacter sp. BSs20148 RepID=M1FFL2_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFP30869.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. BSs20148.;"
PLM3-1_170_b2_sep16_scaffold_2297_2
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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532..984
DNA (453bp) protein (151aa)
hypothetical protein Tax=Microbulbifer variabilis RepID=UPI00036C02E4
Membrane protein {ECO:0000313|EMBL:KIF33145.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
membrane protein
PLM3-1_170_b2_sep16_scaffold_2297_3
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1161..2036
DNA (876bp) protein (292aa)
hypothetical protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037CBEF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDH81371.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
PLM3-1_170_b2_sep16_scaffold_2297_4
uncultured Acidobacteria bacterium A11, Acidobacteria, Bacteria

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2033..3031
DNA (999bp) protein (333aa)
Putative uncharacterized protein Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTJ4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEH26505.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_2297_5
unknown

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comp(3173..4324)
DNA (1152bp) protein (384aa)
Predicted protein Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1EDM1_MICSR
PLM3-1_170_b2_sep16_scaffold_2297_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(4314..4916)
DNA (603bp) protein (201aa)
RNA polymerase, sigma-24 subunit, ECF subfamily protein Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C377D bin=16ft_combo_ws3_JS1 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
RNA polymerase sigma factor, sigma-70 family
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2297_7
unknown

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comp(5054..5152)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2297_8
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5182..6105)
DNA (924bp) protein (308aa)
Flp pilus assembly protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSW0_SYNAS
flp pilus assembly protein
Flp pilus assembly protein {ECO:0000313|EMBL:ABC77166.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
PLM3-1_170_b2_sep16_scaffold_2297_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6110..7069)
DNA (960bp) protein (320aa)
Type II secretion system F domain protein bin=GWA2_Deltaproteo_65_63 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
tadB; Flp pilus assembly protein TadB
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM3-1_170_b2_sep16_scaffold_2297_10
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7066..8436)
DNA (1371bp) protein (457aa)
Type II secretion system protein E Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9YZS9_9NEIS
Type II secretion system protein E {ECO:0000313|EMBL:EEG09812.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
gspE; type II secretion system protein E
PLM3-1_170_b2_sep16_scaffold_2297_11
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8433..9707)
DNA (1275bp) protein (425aa)
response regulator receiver protein; K02282 pilus assembly protein CpaE bin=bin5_DeltaP species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
response regulator receiver protein
Tax=CSP1_8_Deltaproteobacteria
PLM3-1_170_b2_sep16_scaffold_2297_12
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9721..10752)
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKP93791.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
pilus assembly protein
PLM3-1_170_b2_sep16_scaffold_2297_13
Pseudomonas sp. CF161, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10756..11940)
DNA (1185bp) protein (395aa)
Type II/III secretion system protein Tax=Pseudomonas sp. CF161 RepID=S6ITD9_9PSED
Type II/III secretion system protein {ECO:0000313|EMBL:EPL04997.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF161.;"
type II and III secretion system protein
PLM3-1_170_b2_sep16_scaffold_2297_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(11968..12837)
DNA (870bp) protein (290aa)
Putative pilus assembly protein CpaB Tax=Burkholderia pseudomallei RepID=B1H3V6_BURPE
cpaB; Flp pilus assembly protein CpaB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_2297_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(12860..13297)
DNA (438bp) protein (146aa)
TadE family protein bin=GWA2_Deltaproteo_65_63 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
TadE family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 15 items

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