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PLM3-1_170_b2_sep16_scaffold_2477

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2477_1
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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1..2751
DNA (2751bp) protein (917aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
putative Zn-dependent peptidase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3-1_170_b2_sep16_scaffold_2477_2
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

2727..3671
DNA (945bp) protein (315aa)
Glycosyl transferase family 2 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJT4_ROSCS
glycosyl transferase family protein
Tax=RBG_13_OP11_40_15_curated
PLM3-1_170_b2_sep16_scaffold_2477_3
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

3668..4075
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L6M2_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
PLM3-1_170_b2_sep16_scaffold_2477_4
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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4075..4518
DNA (444bp) protein (148aa)
hypothetical protein bin=bin9_gal15 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3-1_170_b2_sep16_scaffold_2477_5
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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4525..4755
DNA (231bp) protein (77aa)
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3-1_170_b2_sep16_scaffold_2477_6
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4771..5382
DNA (612bp) protein (204aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000375C48A
Uncharacterized protein {ECO:0000313|EMBL:EKT76641.1}; Flags: Fragment;; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_2477_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(5330..6121)
DNA (792bp) protein (264aa)
Putative uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NUG0_9DELT bin=16ft_combo_ws3_JS1 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2477_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6118..6990)
DNA (873bp) protein (291aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H385_METFK
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b2_sep16_scaffold_2477_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(7011..9125)
DNA (2115bp) protein (705aa)
ATP-dependent zinc metalloprotease FtsH Tax=Melioribacter roseus (strain P3M) RepID=I6ZNT1_MELRP bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Cell division protease FtsH
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2477_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9170..9493)
DNA (324bp) protein (108aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
tRNA(Ile)-lysidine synthase Tax=Clostridium asparagiforme DSM 15981 RepID=C0DBI7_9CLOT
PLM3-1_170_b2_sep16_scaffold_2477_11
unknown

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9641..9853
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2477_12
unknown

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9884..10150
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2477_trna_1
unknown

Not on your lists

comp(10300..10371)
DNA (72bp)
transferRNA Met
PLM3-1_170_b2_sep16_scaffold_2477_13
unknown

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10517..11170
DNA (654bp) protein (218aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2477_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11175..12695
DNA (1521bp) protein (507aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ACW3_CARHZ bin=16ft_combo_ws3_JS1 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2477_15
unknown

Not on your lists

12759..13535
DNA (777bp) protein (259aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2477_16
unknown

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13930..14415
DNA (486bp) protein (162aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2477_17
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14428..15900
DNA (1473bp) protein (491aa)
MCP domain-containing signal transducer Tax=Halorubrum californiensis DSM 19288 RepID=M0ECP4_9EURY
MCP domain-containing signal transducer {ECO:0000313|EMBL:ELZ45515.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 19288.;"
PLM3-1_170_b2_sep16_scaffold_2477_18
unknown

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15932..17629
DNA (1698bp) protein (566aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_2477_19
CG_Omnitr_04, Omnitrophica, Bacteria

Not on your lists

17626..19287
DNA (1662bp) protein (554aa)
HD-hydrolase domain protein Tax=Thermus sp. CCB_US3_UF1 RepID=G8N8V3_9DEIN
HD-hydrolase domain protein
Tax=CG_Omnitr_04
PLM3-1_170_b2_sep16_scaffold_2477_20
R_WOR_2_45_21, WOR-2, Bacteria

Not on your lists

19284..20948
DNA (1665bp) protein (555aa)
Response regulator receiver modulated metal-dependent phosphohydrolase Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NJS7_DESTT
response regulator receiver modulated metal-dependent phosphohydrolase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_45_21_curated
PLM3-1_170_b2_sep16_scaffold_2477_21
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20948..22306
DNA (1359bp) protein (453aa)
UPI0003CE33FB related cluster Tax=unknown RepID=UPI0003CE33FB
Adhesin {ECO:0000313|EMBL:ESY81782.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
FG-GAP repeat-containing protein
Displaying 22 items

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