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PLM3-1_170_b2_sep16_scaffold_2730

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_2730_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3..329
DNA (327bp) protein (109aa)
Zinc metalloprotease (EC:3.4.24.-)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031, ECO:0000313|EMBL:CBE69540.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Zinc metalloprotease Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJF5_9BACT
PLM3-1_170_b2_sep16_scaffold_2730_2
RIFOXYC2_FULL_WOR_2_45_15_curated, WOR-2, Bacteria

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698..2236
DNA (1539bp) protein (513aa)
Outer membrane protein bin=GWF2_OP3_43_52 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
outer membrane protein assembly complex, YaeT protein
Tax=RIFOXYC2_FULL_WOR_2_45_15_curated
PLM3-1_170_b2_sep16_scaffold_2730_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

2238..6251
DNA (4014bp) protein (1338aa)
AsmA family protein Tax=Selenomonas sp. oral taxon 149 str. 67H29BP RepID=E0P1X0_9FIRM bin=16ft_combo_ws3_JS1 species=Selenomonas sp. oral taxon 149 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_2730_4
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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6259..8391
DNA (2133bp) protein (711aa)
ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3-1_170_b2_sep16_scaffold_2730_5
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8381..8668
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI0002FE5022
glutamyl-tRNA(Gln) amidotransferase subunit C
PLM3-1_170_b2_sep16_scaffold_2730_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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8665..10026
DNA (1362bp) protein (454aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A bin=GWA2_Elusimicrobia_69_24 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3-1_170_b2_sep16_scaffold_2730_7
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10023..11510
DNA (1488bp) protein (496aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B bin=GWA2_Ignavibacteriae_54_16_partial species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
glutamyl-tRNA(Gln) amidotransferase, B subunit
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM3-1_170_b2_sep16_scaffold_2730_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11507..12808
DNA (1302bp) protein (434aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Phosphoribosylamine--glycine ligase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CIU6_MYXFH
phosphoribosylamine--glycine ligase
PLM3-1_170_b2_sep16_scaffold_2730_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12855..13178
DNA (324bp) protein (108aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G876_GEOUR
PLM3-1_170_b2_sep16_scaffold_2730_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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13184..13810
DNA (627bp) protein (209aa)
Sua5/YciO/YrdC/YwlC family protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J4Z0_ANAD2
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:ACL64845.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
PLM3-1_170_b2_sep16_scaffold_2730_11
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

13928..14380
DNA (453bp) protein (151aa)
translation factor SUA5; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Phosphotyrosine protein phosphatase I superfamily
Tax=RBG_16_Zixibacteria_53_22_curated
PLM3-1_170_b2_sep16_scaffold_2730_12
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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14422..14856
DNA (435bp) protein (145aa)
ilvE; branched-chain-amino-acid aminotransferase (EC:2.6.1.42)
Aminotransferase Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GLB3_METTF
Aminotransferase {ECO:0000313|EMBL:BAM70548.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanothermobacter sp. CaT2.;"
PLM3-1_170_b2_sep16_scaffold_2730_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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14829..15323
DNA (495bp) protein (165aa)
Branched-chain amino acid aminotransferase Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G7P2_CHLAD
branched-chain amino acid aminotransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b2_sep16_scaffold_2730_14
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15347..16630
DNA (1284bp) protein (428aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PMG2_9FIRM
PLM3-1_170_b2_sep16_scaffold_2730_15
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

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16655..17644
DNA (990bp) protein (330aa)
ATPase associated with various cellular activities bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
ATPase
Tax=GWC2_Elusimicrobia_56_31_curated
PLM3-1_170_b2_sep16_scaffold_2730_16
CG_Elusi_04, Elusimicrobia, Bacteria

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17641..18081
DNA (441bp) protein (147aa)
von Willebrand factor type A domain protein bin=GWF2_Lentisphaerae_52_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
Tax=CG_Elusi_04
Displaying 16 items

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