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PLM3-1_170_b2_sep16_scaffold_265

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_265_1
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3..611)
DNA (609bp) protein (203aa)
BNR/Asp-box repeat protein bin=GWA2_Ignavibacteria_55_11 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
PLM3-1_170_b2_sep16_scaffold_265_2
S_OP1_64_32, KB1, Bacteria

Not on your lists

1065..1397
DNA (333bp) protein (111aa)
ATPase AAA Tax=Rhodobacter sp. CACIA14H1 RepID=V7EG76_9RHOB
MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein
Tax=S_OP1_64_32
PLM3-1_170_b2_sep16_scaffold_265_3
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1531..3717)
DNA (2187bp) protein (729aa)
Eye protein Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AWI2_MARSH
eye protein
Eye protein {ECO:0000313|EMBL:EAQ99700.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
PLM3-1_170_b2_sep16_scaffold_265_4
R_RIF_OD1_13_53_17, RIF-OD1-13, Parcubacteria, Bacteria

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4240..4617
DNA (378bp) protein (126aa)
DoxX family protein bin=GWC2_Ignavibacteria_38_9 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
DoxX
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_53_17_curated
PLM3-1_170_b2_sep16_scaffold_265_5
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4691..5107
DNA (417bp) protein (139aa)
DGPFAETKE family protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE85_ANADF
DGPFAETKE family protein
DGPFAETKE family protein {ECO:0000313|EMBL:ABS27031.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM3-1_170_b2_sep16_scaffold_265_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5186..6049)
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D2S2_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:KFA86808.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_265_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6180..6515)
DNA (336bp) protein (112aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002FD7C86
Uncharacterized protein {ECO:0000313|EMBL:GAO44233.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
putative histone protein
PLM3-1_170_b2_sep16_scaffold_265_8
Anabaena sp. 90, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6927..7832
DNA (906bp) protein (302aa)
TPR repeat domain-containing protein Tax=Anabaena sp. 90 RepID=K7WC06_9NOST
TPR repeat domain-containing protein
TPR repeat domain-containing protein {ECO:0000313|EMBL:AFW92913.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena sp. 90.;"
PLM3-1_170_b2_sep16_scaffold_265_9
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7892..9145
DNA (1254bp) protein (418aa)
Tetratricopeptide TPR_1 repeat-containing protein Tax=Pseudanabaena sp. PCC 7367 RepID=K9SKC5_9CYAN
hypothetical protein
Tax=RBG_16_Gamma2_64_11_curated
PLM3-1_170_b2_sep16_scaffold_265_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9180..10175
DNA (996bp) protein (332aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Peptidyl-prolyl cis-trans isomerase Tax=Pedosphaera parvula Ellin514 RepID=B9XK09_9BACT
peptidyl-prolyl cis-trans isomerase
PLM3-1_170_b2_sep16_scaffold_265_11
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10288..11448
DNA (1161bp) protein (387aa)
Cysteine desulfurase Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GGE6_9FIRM
cysteine desulfurase
Tax=BJP_IG2157_Desulfuromonadales_56_134
PLM3-1_170_b2_sep16_scaffold_265_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11465..12571
DNA (1107bp) protein (369aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
mnmA; tRNA-specific 2-thiouridylase MnmA; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] bin=bin1_lowGC species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
thiouridylase
PLM3-1_170_b2_sep16_scaffold_265_13
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12568..14670
DNA (2103bp) protein (701aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00037AD2C3
Uncharacterized protein {ECO:0000313|EMBL:GAN34735.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
thioredoxin domain protein
PLM3-1_170_b2_sep16_scaffold_265_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14609..15745)
DNA (1137bp) protein (379aa)
Methylated-DNA--protein-cysteine methyltransferase Tax=Oceanibaculum indicum P24 RepID=K2J9K6_9PROT
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:EKE71512.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ada; transcriptional regulator AraC family
PLM3-1_170_b2_sep16_scaffold_265_15
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(15887..16333)
DNA (447bp) protein (149aa)
CoA-binding domain-containing protein
CoA-binding domain-containing protein; K06929 bin=bin9_gal15 species=Paenibacillus curdlanolyticus genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b2_sep16_scaffold_265_16
unknown

Not on your lists

comp(16335..17051)
DNA (717bp) protein (239aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_265_17
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17169..17684)
DNA (516bp) protein (172aa)
DinB family protein Tax=Paenibacillus lactis 154 RepID=G4H9A6_9BACL
DinB family protein {ECO:0000313|EMBL:EHB68441.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
PLM3-1_170_b2_sep16_scaffold_265_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17835..18356
DNA (522bp) protein (174aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b2_sep16_scaffold_265_19
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18415..18921
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7L1_9BACT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM3-1_170_b2_sep16_scaffold_265_20
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18937..20610)
DNA (1674bp) protein (558aa)
hypothetical protein bin=GWC2_NOV_55_46 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hypothetical protein
Tax=GWC2_Deltaproteobacteria_55_46b_curated
PLM3-1_170_b2_sep16_scaffold_265_21
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20619..21425)
DNA (807bp) protein (269aa)
Glycosyl transferase family 2 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M585_GEODF
family 2 glycosyl transferase
Undecaprenyl-phosphate glycosyltransferase, putative {ECO:0000313|EMBL:ACM19840.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM3-1_170_b2_sep16_scaffold_265_22
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21422..22984)
DNA (1563bp) protein (521aa)
Benzoate-CoA ligase family Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVL9_HALO1
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EYF05781.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
benzoate-CoA ligase family
PLM3-1_170_b2_sep16_scaffold_265_23
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23044..23877
DNA (834bp) protein (278aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00037F8496
Uncharacterized protein {ECO:0000313|EMBL:CDH45911.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_265_24
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23906..24643
DNA (738bp) protein (246aa)
Creatininase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVM0_HALO1
creatininase
Creatininase {ECO:0000313|EMBL:ACY17581.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM3-1_170_b2_sep16_scaffold_265_25
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24640..25728
DNA (1089bp) protein (363aa)
Short-chain dehydrogenase/reductase SDR Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LU12_HALO1
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY17376.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM3-1_170_b2_sep16_scaffold_265_26
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25728..26528
DNA (801bp) protein (267aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase Tax=Sorangium cellulosum So0157-2 RepID=S4XKA1_SORCE
Enoyl-CoA hydratase {ECO:0000313|EMBL:AKF07327.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
PLM3-1_170_b2_sep16_scaffold_265_27
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26528..27376
DNA (849bp) protein (283aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI000379B90F
acyl-CoA dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
Displaying 27 items

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