name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3-1_170_b2_sep16_scaffold_439_1
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria
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Not on your lists |
2..496
|
Glycosyl transferase family 2 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HS39_RUBGI
family 2 glycosyl transferase
Tax=RBG_13_Caldithrix_44_9_curated
|
|
PLM3-1_170_b2_sep16_scaffold_439_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria
|
Not on your lists |
comp(443..1483)
|
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALC1_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH49778.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
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PLM3-1_170_b2_sep16_scaffold_439_3
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria
|
Not on your lists |
comp(1494..2990)
|
Periplasmic polysaccharide export protein bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
capsule polysaccharide export system periplasmic protein KpsD
Tax=RBG_16_Zixibacteria_43_9_curated
|
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PLM3-1_170_b2_sep16_scaffold_439_4
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3227..4714)
|
hypothetical protein Tax=Henriciella marina RepID=UPI0003624372
putative transmembrane polysaccharide biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:KFL27313.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
|
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PLM3-1_170_b2_sep16_scaffold_439_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria
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Not on your lists |
comp(4733..5764)
|
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
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PLM3-1_170_b2_sep16_scaffold_439_6
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(5757..6218)
|
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase bin=GWC2_Proteo_65_14_Ab886 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=BJP_08E140C01_Clostridiales_46_19
|
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PLM3-1_170_b2_sep16_scaffold_439_7
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria
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Not on your lists |
comp(6215..7270)
|
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase Tax=alpha proteobacterium BAL199 RepID=A8U357_9PROT
Tax=RBG_13_Nitrospirae_39_12_curated
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PLM3-1_170_b2_sep16_scaffold_439_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria
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Not on your lists |
comp(7496..8470)
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NAD-dependent epimerase/dehydratase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2A0_HERA2
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Acidobacteria_70_10_curated
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PLM3-1_170_b2_sep16_scaffold_439_9
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria
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Not on your lists |
comp(8474..9424)
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hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI00036A0531
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
|
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PLM3-1_170_b2_sep16_scaffold_439_10
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria
|
Not on your lists |
comp(9421..10149)
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Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase Tax=Megasphaera sp. BV3C16-1 RepID=U7UQS2_9FIRM
|
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PLM3-1_170_b2_sep16_scaffold_439_11
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10146..11120)
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Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Short=DHOD B;; Short=DHODase B;; Short=DHOdehase B;; EC=1.3.1.14;; Dihydroorotate oxidase B; Orotate reductase (NADH); species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=PYRDB_GEOLS
dihydroorotate dehydrogenase
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PLM3-1_170_b2_sep16_scaffold_439_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
comp(11117..11923)
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Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBA1_AMMDK bin=16ft_combo_ws3_JS1 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
dihydroorotate dehydrogenase electron transfer subunit
Tax=RBG_16_RIF_WS3X_71_46_curated
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PLM3-1_170_b2_sep16_scaffold_439_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
comp(11920..13722)
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Outer membrane assembly lipoprotein YfiO Tax=Rhodothermus marinus RepID=D0MIU6_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
|
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PLM3-1_170_b2_sep16_scaffold_439_14
R_NC10_66_22, NC10, Bacteria
|
Not on your lists |
comp(13758..15074)
|
pyrC; dihydroorotase (EC:3.5.2.3) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pyrC; dihydroorotase (EC:3.5.2.3)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
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PLM3-1_170_b2_sep16_scaffold_439_15
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria
|
Not on your lists |
comp(15043..16041)
|
Aspartate carbamoyltransferase Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W0B1_DESAS
pyrB; aspartate carbamoyltransferase catalytic subunit
Tax=RBG_16_Zixibacteria_53_22_curated
|
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PLM3-1_170_b2_sep16_scaffold_439_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
comp(16038..16607)
|
uracil phosphoribosyltransferase (EC:2.4.2.9); K02825 pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase (EC:2.4.2.9)
Tax=RBG_16_RIF_WS3X_71_46_curated
|
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PLM3-1_170_b2_sep16_scaffold_439_17
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16788..18122
|
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI000361C884
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:CAL93003.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
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PLM3-1_170_b2_sep16_scaffold_439_18
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea
|
Not on your lists |
18135..18902
|
O-methyltransferase-like protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S225_FERPA
O-methyltransferase-like protein
O-methyltransferase-like protein {ECO:0000313|EMBL:ADC66516.1}; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
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PLM3-1_170_b2_sep16_scaffold_439_19
unknown
|
Not on your lists |
comp(18848..20275)
|
hypothetical protein Tax=Bacillus cereus RepID=UPI00034D5467
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|
PLM3-1_170_b2_sep16_scaffold_439_20
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20360..21382
|
Putative glycosyltransferase Tax=Methylomicrobium album BG8 RepID=H8GLZ2_METAL
Putative glycosyltransferase {ECO:0000313|EMBL:EIC28188.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
glycosyl transferase family protein
|
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PLM3-1_170_b2_sep16_scaffold_439_21
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria
|
Not on your lists |
comp(21379..23553)
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Uncharacterized protein {ECO:0000313|EMBL:KER09206.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
Putative uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
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PLM3-1_170_b2_sep16_scaffold_439_22
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria
|
Not on your lists |
comp(23566..24558)
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Polysaccharide chain length determinant protein Tax=Geobacter metallireducens RepID=Q39VZ4_GEOMG
lipopolysaccharide biosynthesis protein
Tax=RBG_16_Elusimicrobia_66_12_curated
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PLM3-1_170_b2_sep16_scaffold_439_23
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria
|
Not on your lists |
comp(24682..26412)
|
Uncharacterized protein Tax=uncultured bacterium RepID=L7Y6P1_9BACT
hypothetical protein
Tax=RBG_16_Zixibacteria_48_11_curated
|
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PLM3-1_170_b2_sep16_scaffold_439_24
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26610..27314)
|
Ubiquinone biosynthesis O-methyl transferase Tax=Beggiatoa sp. PS RepID=A7BSS8_9GAMM
Ubiquinone biosynthesis O-methyl transferase {ECO:0000313|EMBL:EDN70406.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
hypothetical protein
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PLM3-1_170_b2_sep16_scaffold_439_25
Selenomonas sp. FOBRC6, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria
|
Not on your lists |
comp(27336..28265)
|
ABC transporter, ATP-binding protein Tax=Selenomonas sp. FOBRC6 RepID=J4QBP0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJO23025.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. FOBRC6.;"
cobalt transporter ATP-binding subunit
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PLM3-1_170_b2_sep16_scaffold_439_26
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28845..30026)
|
UPF0272 protein GM21_3731 Tax=Geobacter sp. (strain M21) RepID=Y3731_GEOSM
hypothetical protein
UPF0272 protein GM21_3731 {ECO:0000255|HAMAP-Rule:MF_01074}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
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PLM3-1_170_b2_sep16_scaffold_439_27
RLO_PLX_64_10, Bacteria
|
Not on your lists |
comp(30023..30877)
|
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B49F05
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
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PLM3-1_170_b2_sep16_scaffold_439_28
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
comp(30855..31901)
|
tRNA-dihydrouridine synthase Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QSY2_ACEAZ bin=16ft_combo_ws3_JS1 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
tRNA-U20-dihydrouridine synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
|
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PLM3-1_170_b2_sep16_scaffold_439_29
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria
|
Not on your lists |
comp(31906..33543)
|
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RNL4_FIBSS bin=16ft_combo_ws3_JS1 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
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PLM3-1_170_b2_sep16_scaffold_439_30
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33540..33806)
|
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase Tax=mine drainage metagenome RepID=T1B682_9ZZZZ
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
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