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PLM3-1_170_b2_sep16_scaffold_503

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_503_1
unknown

Not on your lists

comp(2..880)
DNA (879bp) protein (293aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_503_2
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

1093..3690
DNA (2598bp) protein (866aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CG_Arma_01
PLM3-1_170_b2_sep16_scaffold_503_3
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3741..6020)
DNA (2280bp) protein (760aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037C551E
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAN45498.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
fadE; acyl-CoA dehydrogenase
PLM3-1_170_b2_sep16_scaffold_503_4
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6238..6864)
DNA (627bp) protein (209aa)
Uncharacterized protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVM6_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06529.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
PLM3-1_170_b2_sep16_scaffold_503_5
GWD2_Elusimicrobia_63_28_curated, Elusimicrobia, Bacteria

Not on your lists

7118..7645
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IQA2_9PLAN
hypothetical protein
Tax=GWD2_Elusimicrobia_63_28_curated
PLM3-1_170_b2_sep16_scaffold_503_6
Shewanella benthica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8087..8719
DNA (633bp) protein (211aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI0003751B38
Uncharacterized protein {ECO:0000313|EMBL:EDQ01105.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella benthica KT99.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_503_7
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8706..9932
DNA (1227bp) protein (409aa)
hypothetical protein Tax=Burkholderia sp. JPY251 RepID=UPI00037BB0F3
Uncharacterized protein {ECO:0000313|EMBL:KHD20242.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_503_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(9981..12170)
DNA (2190bp) protein (730aa)
Putative uncharacterized protein Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KAP8_NITWC
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_503_9
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12406..14805
DNA (2400bp) protein (800aa)
Uncharacterized protein Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQV8_DESBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU89187.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
PLM3-1_170_b2_sep16_scaffold_503_10
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14768..15670
DNA (903bp) protein (301aa)
Endonuclease/exonuclease/phosphatase family Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S4A7_9DELT
Endonuclease/exonuclease/phosphatase family {ECO:0000313|EMBL:ERK90511.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
endonuclease/exonuclease/phosphatase
PLM3-1_170_b2_sep16_scaffold_503_11
unknown

Not on your lists

15773..16486
DNA (714bp) protein (238aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_503_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

16627..19221
DNA (2595bp) protein (865aa)
Putative uncharacterized protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XWI0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3-1_170_b2_sep16_scaffold_503_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19199..19561)
DNA (363bp) protein (121aa)
Cupin domain-containing protein Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KT20_SOLCM
cupin domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3-1_170_b2_sep16_scaffold_503_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

19656..21353
DNA (1698bp) protein (566aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003625D24
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:AIE85006.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM3-1_170_b2_sep16_scaffold_503_15
uncultured Acetothermia bacterium, Acetothermia, Bacteria

Not on your lists

comp(21380..21985)
DNA (606bp) protein (202aa)
Acetyltransferase GNAT family protein Tax=uncultured candidate division OP1 bacterium RepID=H5SR70_9BACT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:BAL54833.1}; species="Bacteria; Acetothermia; environmental samples.;" source="uncultured Acetothermia bacterium.;"
GCN5-like N-acetyltransferase
PLM3-1_170_b2_sep16_scaffold_503_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(21982..23709)
DNA (1728bp) protein (576aa)
Serine/threonine protein kinase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
transcriptional regulator domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b2_sep16_scaffold_503_17
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

23870..24352
DNA (483bp) protein (161aa)
Tax=RBG_16_Elusimicrobia_66_12_curated
PLM3-1_170_b2_sep16_scaffold_503_18
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(24355..24579)
DNA (225bp) protein (75aa)
Tax=RBG_16_Zixibacteria_53_22_curated
PLM3-1_170_b2_sep16_scaffold_503_19
unknown

Not on your lists

comp(24637..24945)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_503_20
unknown

Not on your lists

comp(25299..26003)
DNA (705bp) protein (235aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_503_21
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(26172..28778)
DNA (2607bp) protein (869aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGR4_ANADF
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_170_b2_sep16_scaffold_503_22

Not on your lists

28941..29405
DNA (465bp) protein (155aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFT7_SYNFM
Marine sediment metagenome DNA, contig: S01H1_L04922 {ECO:0000313|EMBL:GAF73058.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b2_sep16_scaffold_503_23
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29473..30807)
DNA (1335bp) protein (445aa)
Outer membrane protein assembly factor BamA bin=GWC2_Deltaproteobacteria_42_51 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
surface antigen (D15)
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
PLM3-1_170_b2_sep16_scaffold_503_24
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30811..31779)
DNA (969bp) protein (323aa)
hypothetical protein Tax=Spirosoma luteum RepID=UPI000364214A
Uncharacterized protein {ECO:0000313|EMBL:AKH82190.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
putative NAD-dependent epimerase/dehydratase
PLM3-1_170_b2_sep16_scaffold_503_25
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(31872..32813)
DNA (942bp) protein (314aa)
alias=16ft_combo_ws3_scaffold_1271_4 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_503_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

32980..34110
DNA (1131bp) protein (377aa)
Calcium/proton exchanger Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60CG4_METCA bin=16ft_combo_ws3_JS1 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
cax-1; calcium/proton exchanger
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_503_27
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34121..35239)
DNA (1119bp) protein (373aa)
Linoleoyl-CoA desaturase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMQ3_CORCM
des6; Linoleoyl-CoA desaturase
Linoleoyl-CoA desaturase {ECO:0000313|EMBL:AFE08562.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM3-1_170_b2_sep16_scaffold_503_28
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(35420..36700)
DNA (1281bp) protein (427aa)
Uncharacterized protein Tax=Melioribacter roseus (strain P3M) RepID=I7A3J4_MELRP bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_503_29
Equus caballus, Equus, Perissodactyla, Mammalia, Chordata, Metazoa

Not on your lists

comp(36697..37491)
DNA (795bp) protein (265aa)
PREDICTED: protein piccolo Tax=Equus caballus RepID=UPI0001797E8F
Uncharacterized protein {ECO:0000313|Ensembl:ENSECAP00000014482}; Flags: Fragment;; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.;" source="Equus caballus (Horse).;"
PLM3-1_170_b2_sep16_scaffold_503_30
RLO_PLX_64_10, Bacteria

Not on your lists

comp(37521..40868)
DNA (3348bp) protein (1116aa)
Chromosome segregation ATPase-like protein Tax=Rhodothermus marinus RepID=D0MKF4_RHOM4 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
chromosome segregation ATPase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Displaying items 1-30 of 37 in total

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